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ProteomicsThe OGT TPR Interactome defined by BioID
BioID performed in HeLa cells for the TPR domain of The O-GlcNAc Transferase and eGFP (negative control). Used to determine TPR interactors and the TPR interactome in HeLa cells. Three biological replicates were performed, with each replicate having an experimental (TPR-BirA*) and negative (eGFP-Bir...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2020-06-24 | MSV000085626 | MassIVE
TranscriptomicsTranscription profiling of individual bovine nuclear transfer blastocysts
Individual zona free in vitro grown bovine day 7 blastocysts were compared to stage and quality matched nuclear transfer derived blastocysts (fibroblast donor cells).
ORGANISM(S): Bos taurus 
2006-02-14 | E-MEXP-556 | biostudies-arrayexpress
ProteomicsOrigin of N-glycan site-specific heterogeneity glycopeptide analysis by LC-MSMS
LC-MS/MS analysis of glycopeptides of protein disulfide-isomerase (PDI1), etanercept, erythropoietin (EPO), low affinity immunoglobulin gamma Fc region receptor III-A (FCGR3A), and spike glycoprotein (S) from wild type and Lec1 (GnT1-/-) HEK293 cells
ORGANISM(S): Homo sapiens (Human) 
2022-10-14 | PXD032149 | Pride
N-glycan heterogeneity glycopeptide lc-msms 
ProteomicsA hinge glycan regulates spike bending and impacts coronavirus infectivity
Analysis of the structures and distributions of native spike conformations on vitrified human coronavirus NL63 (HCoV-NL63) virions without chemical fixation by cryogenic electron tomography (cryoET) and subtomogram averaging, along with site-specific glycan composition and occupancy determined by ma...
ORGANISM(S): Cercopithecus aethiops (Green monkey) (Grivet) 
2024-01-26 | PXD039247 | Pride
Spike N-glycan Coronavirus 
ProteomicsAnalysis of SARS-CoV-2 S and human ACE2 protein by LC-MS
Analysis of intact O-linked glycopeptides for SARS-Cov-2 S and human ACE2 protein by LC-MS
ORGANISM(S): Homo sapiens (Human) Severe acute respiratory syndrome coronavirus 2 
2020-09-09 | PXD019940 | Pride
Sars-cov-2 s ace2 o-glycopeptide lc-ms 
ProteomicsAnalysis of SARS-CoV-2 S protein by LC-MS
Analysis of disulfide bonds for SARS-Cov-2 S protein by LC-MS
ORGANISM(S): Severe acute respiratory syndrome coronavirus 2 
2020-09-09 | PXD019939 | Pride
Sars-cov-2 s disulfide lc-ms 
ProteomicsAnalysis of SARS-CoV-2 S and human ACE2 protein by LC-MS
Analysis of deglycosylated N-linked glycopeptides for SARS-Cov-2 S and human ACE2 protein by LC-MS
ORGANISM(S): Homo sapiens (Human) Severe acute respiratory syndrome coronavirus 2 
2020-09-09 | PXD019938 | Pride
Sars-cov-2 s ace2 deglycoslyation lc-ms 
ProteomicsAnalysis of SARS-CoV-2 S and human ACE2 protein by LC-MS
Analysis of intact N-linked glycopeptides for SARS-Cov-2 S and huamn ACE2 protein by LC-MS
ORGANISM(S): Severe acute respiratory syndrome coronavirus 2 
2020-09-09 | PXD019937 | Pride
Sars-cov-2 s ace2 n-glycopeptide lc-ms 
ProteomicsAnalysis of SARS-CoV-2 S protein by LC-MS
Analysis of disulfide bonds for SARS-Cov-2 S protein by LC-MS
ORGANISM(S): Severe acute respiratory syndrome coronavirus 2 
2021-06-08 | PXD026560 | Pride
Sars-cov-2 s disulfide lc-ms 
TranscriptomicsO-linked β-N-acetylglucosamine (O-GlcNAc) acts as a glucose sensor to epigenetically regulate the insulin gene in pancreatic beta cells
We compare global gene expression changes in the Min6 cell line in response to altered glucose flux and pharmacological manipulation of the O-GlcNAc postranslational protein modification. Min6 cells were treated for 1hr in the following conditions: Low glucose (LG), high glucose (HG) and LG+GlcNAcst...
ORGANISM(S): Mus musculus 
2016-02-22 | E-GEOD-74980 | biostudies-arrayexpress
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