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ProteomicsPptc7 is an essential phosphatase for promoting mammalian mitochondrial metabolism and biogenesis
Mitochondrial proteins are replete with phosphorylation; however, the origin, abundance, and functional relevance of these modifications are largely unclear. Nonetheless, mitochondria possess multiple resident phosphatases, suggesting that protein dephosphorylation may be broadly important for mitoc...
ORGANISM(S): Mus musculus (Mouse) 
2019-05-29 | PXD012743 | Pride
Mitochondia Pptc7 Phosphoproteome 
ProteomicsTrypanosomal Pam18/Pam16 and maxicircle replication – TbPam16 CoIPs
Protein import and genome replication are essential processes for mitochondrial biogenesis and propagation. The J-domain proteins Pam16 and Pam18 regulate the presequence translocase of the mitochondrial inner membrane. In the protozoan Trypanosoma brucei, their counterparts are TbPam16 and TbPam18,...
ORGANISM(S): Trypanosoma brucei 
2024-07-20 | PXD046849 | Pride
Trypanosoma brucei Proteomics Mitochondrial genome replication Affinity purification-mass spectrometry Silac Maxicircle replication 
TranscriptomicsGenomic Characterization of Adaptive Mutations that Effect Minimal Fitness Trade-offs in Evolved Clones of Saccharomyces cerevisiae
In some of the earliest uses of genome-wide gene-expression microarrays and array-based Comparative Genomic Hybridization (aCGH), a set of diploid yeasts that had undergone experimental evolution under aerobic glucose limitation was used to explore how gene expression and genome structure had respon...
ORGANISM(S): Saccharomyces cerevisiae 
2011-11-02 | E-GEOD-25081 | biostudies-arrayexpress
ProteomicsRole of TbTim20 in mitochondrial protein import in trypanosomes – TbTim20 CoIPs
Protein import across the mitochondrial inner membrane typically depends on two protein translocases of the inner membrane (TIM) complexes and the membrane potential. The protozoan parasite Trypanosoma brucei, however, has a single, divergent TIM complex. Unlike other trypanosomal TIM subunits, TbTi...
ORGANISM(S): Trypanosoma brucei 
2025-10-27 | PXD061390 | Pride
Trypanosoma brucei Proteomics Affinity purification-mass spectrometry Mitochondrial genome Silac Mitochondrial protein import 
OtherA proteomics search algorithm specifically designed for high-resolution tandem mass spectra.
Data from the authors [[www.chem.wisc.edu/~coon/Downloads/Morpheus web site]]. Experiment: yeast cad, file: 2010-12-05_Yeast_Trypsin_IT_CAD_Rep4.mgf. Published as part of J Proteome Res. 2013 Mar 1;12(3):1377-86 [[http://www.ncbi.nlm.nih.gov/pubmed/23323968 PubMed]]. From the Abstract: {{i}} ... For...
ORGANISM(S): Yeast 
GPM11210018150 | GPMDB
UnknownHomologue replacement in the import motor of the mitochondrial inner membrane of trypanosomes.
Not available
S-EPMC7064343 | biostudies-literature
UnknownThe Oligomerization Domains of the APC Protein Mediate Liquid-Liquid Phase Separation That Is Phosphorylation Controlled.
Not available
S-EPMC10095272 | biostudies-literature
ProteomicsRole of TbTim20 in mitochondrial protein import in trypanosomes – TbTim20 RNAi data
Protein import across the mitochondrial inner membrane typically depends on two protein translocases of the inner membrane (TIM) complexes and the membrane potential. The protozoan parasite Trypanosoma brucei, however, has a single, divergent TIM complex. Unlike other trypanosomal TIM subunits, TbTi...
ORGANISM(S): Trypanosoma brucei 
2025-10-27 | PXD061395 | Pride
Trypanosoma brucei Proteomics Mitochondrial genome Rnai-induced gene depletion Label-free quantification Mitochondrial protein import 
UnknownHumidity-Sensing Properties of an 1D Antiferromagnetic Oxalate-Bridged Coordination Polymer of Iron(III) and Its Temperature-Induced Structural Flexibility.
Not available
S-EPMC8509436 | biostudies-literature
TranscriptomicsHuman PC-3 prostate cancer cells: Control (shNTC; non-target shRNA) vs. shETV4 knock down (shETV4)
Transcriptional profiling of human PC-3 prostate cancer cells lentivirally infected with non-target control (NTC) short hairpin (sh)RNA comparing with lentivirally shRNA mediated human ETV4 knock-down. Cells were either cultured for 24 hours at 20% oxygen tension or 0.2% oxygen. Goal was to determin...
ORGANISM(S): Homo sapiens 
2011-12-06 | E-GEOD-32385 | biostudies-arrayexpress
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