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TranscriptomicsUnveiling immune interference: How dendritic cell response to co-infection with Aspergillus fumigatus is modulated by human cytomegalovirus and its virokine CMVIL10
We confronted moDCs with wildtype (WT) HCMV TB40E BAC4 or ΔUL111A (HCMV lacking CMVIL-10) with an MOI of 3 and/or A. fumigatus germ tubes with an MOI of 0.5 for 9 h, either individually (single infection) or simultaneously (co-infection), and performed RNA-seq. moDCs were incubated with or without 5...
ORGANISM(S): Homo sapiens 
2025-09-09 | E-MTAB-15110 | biostudies-arrayexpress
TranscriptomicsTranscriptome data of interacting Salmonella Typhimurium and human host cells
The poly(A)+ and poly(A)− fractions of interacting and non-interacting cells were used for distinct library preparation of interacting and non-interacting prokaryotic pathogen and eukaryotic host cells by deepSuperSAGE. Sequencing was performed with the Illumina HiSeq 2000 platform, and one point of...
ORGANISM(S): Salmonella enterica 
2015-05-12 | E-GEOD-61730 | biostudies-arrayexpress
ProteomicsA global data-driven census of Salmonella small proteins and their potential functions in bacterial virulence
Small proteins are an emerging class of gene products with diverse roles in bacterial physiology. However, a full understanding of their importance has been hampered by insufficient genome annotations and a lack of characterization in microbes other than Escherichia coli. Here, we have taken an inte...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium 
2020-12-07 | PXD018754 | Pride
Salmonella typhimurium Virulence Dual rna-seq Grad-seq Tradis Host-pathogen interaction Infection Mgrb Spepfinder Small proteins Ribo-seq 
UnknownResolving host-pathogen interactions by dual RNA-seq.
Not available
S-EPMC5313147 | biostudies-literature
UnknownCardiac overexpression of human VEGF(165) by recombinant Semliki Forest virus leads to adverse effects in pressure-induced heart failure.
Not available
S-EPMC2153471 | biostudies-literature
UnknownFunctional characterization of the DUF1127-containing small protein YjiS of <i>Salmonella</i> Typhimurium.
Not available
S-EPMC11707872 | biostudies-literature
UnknownThe Major RNA-Binding Protein ProQ Impacts Virulence Gene Expression in Salmonella enterica Serovar Typhimurium.
Not available
S-EPMC6315103 | biostudies-literature
UnknownImproved bacterial RNA-seq by Cas9-based depletion of ribosomal RNA reads.
Not available
S-EPMC7373992 | biostudies-literature
UnknownImproved RNA stability estimation through Bayesian modeling reveals most Salmonella transcripts have subminute half-lives.
Not available
S-EPMC10998600 | biostudies-literature
UnknownIntramacrophage RIL-seq uncovers an RNA antagonist of the Salmonella virulence-associated small RNA PinT.
Not available
S-EPMC12721325 | biostudies-literature
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