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TranscriptomicsPotential link between biotic defense activation and recalcitrance to induction of somatic embryogenesis in shoot primordia from adult trees of white spruce (Picea glauca)
The goal is to examine the molecular aspects underpinning somatic embryogenesis (SE) within shoot tissues of adult white spruce trees by conducting transcriptome-wide expression profiling of shoot explants taken from responsive and nonresponsive genotypes. One-color analysis of vegetative buds in so...
ORGANISM(S): Picea glauca 
2013-10-17 | E-GEOD-46977 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila developmental time series
Michelle N. Arbeitman, Eileen E. M. Furlong, Farhad Imam, Eric Johnson, Brian H. Null, Bruce S. Baker, Mark A. Krasnow, Matthew P. Scott, Ronald W. Davis and Kevin P. White. Gene Expression During the Life Cycle of Drosophila melanogaster, Science, 297: 2270-2275, 2002. This work can be accessed fro...
ORGANISM(S): Drosophila melanogaster 
2004-11-06 | E-FLYC-6 | biostudies-arrayexpress
MetabolomicsMultiomic profiling of iron-deficient infant monkeys reveals alterations in neurologically important biochemicals in serum and cerebrospinal fluid before the onset of anemia

The effects of iron deficiency (ID) during infancy extend beyond the hematologic compartment and include short- and long-term adverse effects on many tissues including the brain. However, sensitive biomarkers of iron-dependent brain health are lacking in humans. To determine whether serum and cer...

2022-07-12 | MTBLS3388 | MetaboLights
ProteomicsIdentification of Amblyomma americanum antigens after vaccination with tick extracellular vesicles in white-tailed deer
Anti-tick vaccines represent a promising alternative to chemical acaricides for the management of ticks on wildlife; however little progress has been made to produce an effective vaccine in hosts relevant to tick reproduction. Further, most of the antigens described are expressed during feeding in d...
ORGANISM(S): Odocoileus virginianus Amblyomma americanum 
2025-05-26 | PXD058874 | Pride
Antigens Tick Vaccination 
TranscriptomicsTranscription profiling of human leukocytes from chronic myeloid leukemia patients exhibiting differing responses to imatinib
This is a class prediction experiment, where the class is the response status to imatinib (also called Gleevec), a drug used to treat patients with chronic myelogenous leukemia (CML). There are two data sets, a training set (from Leipzig, 8 Responders and 5 Non-Responders) and a validation set (fro...
ORGANISM(S): Homo sapiens 
2007-08-25 | E-GEOD-2535 | biostudies-arrayexpress
TranscriptomicsTranscript profiling of UBIproPtMYB14 and CADproPtMYB14 in transgenic White spruce plantlets
Transcription factors play a fundamental role in plants by orchestrating temporal and spatial gene expression in response to environmental stimuli. Several R2R3-MYB genes of the Arabidopsis subgroup 4 (Sg4) share a C-terminal EAR motif signature recently linked to stress response in angiosperm plant...
ORGANISM(S): Picea glauca 
2012-03-01 | E-MEXP-3575 | biostudies-arrayexpress
ProteomicsAlpine Willows (Salix, Salicaceae)
Contrasting levels of beta-diversity and underlying phylogenetic trends indicate different paths to chemical diversity in highland and lowland willow species Martin Volf*, Jing Vir Leong, Paola de Lima Ferreira, Tereza Volfova, Petr Kozel, Pavel Matos-Maravi, Elvira Horandl, Natascha D. Wagner, Niko...
ORGANISM(S): Salix Elaeagnos (ncbitaxon:386449) Salix Retusa (ncbitaxon:77066) Salix Viminalis (ncbitaxon:40686) Salix Breviserrata (ncbitaxon:1533360) Salix Acutifolia (ncbitaxon:1233969) Salix Fragilis (ncbitaxon:77063) Salix Foetida (ncbitaxon:470271) Salix Helvetica (ncbitaxon:470273) Salix Mielichhoferi Salix Alba (ncbitaxon:75704) Salix Triandra (ncbitaxon:77069) Salix Caprea (ncbitaxon:172267) Salix Lapponum (ncbitaxon:470272) Salix Caesia (ncbitaxon:470572) Salix Daphnoides (ncbitaxon:470274) Salix Waldsteiniana Salix Reticulata (ncbitaxon:75717) Salix Pentandra (ncbitaxon:75715) Salix Hastata (ncbitaxon:75710) Salix Rosmarinifolia (ncbitaxon:717491) Salix Myrtilloides (ncbitaxon:669809) Salix Aurita (ncbitaxon:470270) Salix Herbacea (ncbitaxon:77064) Salix Repens (ncbitaxon:467613) Salix Bicolor (ncbitaxon:1533359) Salix Purpurea (ncbitaxon:77065) Salix Glaucosericea Populus Tremula (ncbitaxon:113636) Salix Serpyllifolia (ncbitaxon:77067) Salix Cinerea (ncbitaxon:470278) 
2023-04-21 | MSV000091773 | MassIVE
TranscriptomicsThe transcriptomes of two heritable cell types illuminate the circuit governing their differentiation
The differentiation of cells into distinct cell types, each of which is heritable for many generations, underlies many biological phenomena. White and opaque cells of the fungal pathogen Candida albicans are two such heritable cell types, each thought to be adapted to unique niches within their huma...
ORGANISM(S): Candida albicans 
2010-06-25 | E-GEOD-21291 | biostudies-arrayexpress
MetabolomicsOperational tolerance after hematopoietic stem cell transplantation is characterized by distinct transcriptional, phenotypic, and metabolic signatures (Cohort 2).
The mechanisms underlying operational tolerance after hematopoietic stem cell transplantation in humans are poorly understood. We studied two independent cohorts of patients who underwent allogeneic hematopoietic stem cell transplantation from human leukocyte antigen-identical siblings. Primary tole...
2021-12-22 | MTBLS221 | MetaboLights
MetabolomicsOperational tolerance after hematopoietic stem cell transplantation is characterized by distinct transcriptional, phenotypic, and metabolic signatures (Cohort 1).
The mechanisms underlying operational tolerance after hematopoietic stem cell transplantation in humans are poorly understood. We studied two independent cohorts of patients who underwent allogeneic hematopoietic stem cell transplantation from human leukocyte antigen-identical siblings. Primary tole...
2021-12-22 | MTBLS220 | MetaboLights
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