Wilson K S KS - OmicsDI

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Unknown (549)
Genomics (25)
Transcriptomics (6)
Metabolomics (4)
Proteomics (1)

Organisms

Homo sapiens (30)
Mus musculus (1)
Lobomonas rostrata (1)
Picea asperata (1)
Mesorhizobium loti (1)
Cervus elaphus kansuensis (1)
Varanus komodoensis (1)
Klebsiella phage ST405-OXA48phi1.1 (1)
Quercus ilex subsp. ilex (1)
NEWT:11191 (1)
Apostasia shenzhenica (1)
Drosophila montana (1)
Aeromonas hydrophila NJ-35 (1)
unclassified Viridiplantae (1)
Plasmodium falciparum V1 (1)
Conus magus (1)
Mycobacterium tuberculosis variant bovis BCG str. Moreau (1)
Nanorana parkeri (1)
Pseudomonas sp. TDA1 (1)
Streptomyces rimosus subsp. rimosus (1)
Erythrina fusca (1)
bioreactor metagenome (1)
Murine cytomegalovirus (strain Smith) (1)
Manis pentadactyla (1)
Microbacterium sp. LEw-1055 (1)
Hypoxis hemerocallidea (1)
Duck hepatitis virus SD01 (1)
Salmonella enterica (1)
NEWT:338187 (1)
Cuscuteae (1)

Repository

EGA (25)
biostudies-arrayexpress (6)
MetaboLights (4)
pride (1)

Tissue

Primary cell (1)
Fibroblast (1)

Disease

Developmental and epileptic encephalopathy 9 (1)

Technology Type

Mass spectrometry (3)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
NMR spectroscopy (1)
SWATH MS (1)
Mass Spectrometry (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (2)
Bruker (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2015 (2)
2023 (2)
2016 (1)
2014 (1)
2010 (1)
2005 (1)
2022 (1)
2021 (1)
2019 (1)

CHEBI ID

CHEBI:185590 (1)
CHEBI:185033 (1)
CHEBI:185082 (1)
CHEBI:184433 (1)
CHEBI:185588 (1)
CHEBI:185586 (1)
CHEBI:185161 (1)
CHEBI:185584 (1)
CHEBI:184906 (1)
CHEBI:185183 (1)
CHEBI:185582 (1)
CHEBI:185580 (1)
CHEBI:184474 (1)
CHEBI:184829 (1)
CHEBI:185175 (1)
CHEBI:184782 (1)
CHEBI:185578 (1)
CHEBI:184420 (1)
CHEBI:185576 (1)
CHEBI:184776 (1)
CHEBI:184405 (1)
CHEBI:185575 (1)
CHEBI:185573 (1)
CHEBI:185571 (1)
CHEBI:185568 (1)
CHEBI:185567 (1)
CHEBI:184791 (1)
CHEBI:169793 (1)
CHEBI:185564 (1)
CHEBI:185562 (1)

Metabolite Name

4-acetamidobutanal (1)
Fructose 1,6-bisphosphate (1)
PS(DIME(11,5)/MONOME(13,5)) (1)
4,4,10-Trimethyl-1,11-bis(3-methylbut-2-en-1-yl)-10-(4-methylpent-3-en-1-yl)-9-(2-methylpropanoyl)-3-oxatricyclo[7.3.1.0²,⁷]trideca-2(7),5-diene-8,13-dione (1)
2-{[3,4-dihydroxy-5,6-bis({[(2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoyl]oxy})oxan-2-yl]methoxy}-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl (2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate (1)
{2-[(7Z,10Z,13Z,16Z)-docosa-7,10,13,16-tetraenoyloxy]-3-(tetracosanoyloxy)propoxy}[2-(methylamino)ethoxy]phosphinic acid (1)
TG(20:1(11Z)/22:2(13Z,16Z)/20:2(11Z,14Z)) (1)
1-(8-{[6-({[3,5-dihydroxy-6-(hydroxymethyl)-4-{[3,4,5-trihydroxy-6-({[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)oxan-2-yl]oxy}oxan-2-yl]oxy}methyl)-3,4,5-trihydroxyoxan-2-yl]oxy}-1-hydroxy-6-methoxy-3-methylnaphthalen-2-yl)ethan-1-one (1)
2-amino-4-({1-[(carboxymethyl)-C-hydroxycarbonimidoyl]-2-({[3-(methylsulfanyl)propyl]thio(carbonoimidyl)}sulfanyl)ethyl}-C-hydroxycarbonimidoyl)butanoic acid (1)
(2E)-N-{2-[5,5'-dihydroxy-3'-(2-{[(2E)-1-hydroxy-3-(4-hydroxy-3-methoxyphenyl)prop-2-en-1-ylidene]amino}ethyl)-1H,1'H-[4,4'-biindole]-3-yl]ethyl}-3-(4-hydroxyphenyl)prop-2-enimidic acid (1)
(2R,3R)-2-(3,4-Dihydroxyphenyl)-6-[(2R,3R,4S)-2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-3-(3,4,5-trihydroxybenzoyloxy)-3,4-dihydro-2H-1-benzopyran-4-yl]-5,7-dihydroxy-3,4-dihydro-2H-1-benzopyran-3-yl 3,4,5-trihydroxybenzoate (1)
2-(Hydroxymethyl)-6-[(3,4,5-trihydroxy-6-{[16-hydroxy-2,6,6,10,11-pentamethyl-14-(6-methyl-2-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}hept-5-en-2-yl)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-5-yl]oxy}oxan-2-yl)methoxy]oxane-3,4,5-triol (1)
5-(6-hydroxy-4-{5-[(E)-2-[6-hydroxy-3-(3-hydroxyphenyl)-2-(4-hydroxyphenyl)-2,3-dihydro-1-benzofuran-4-yl]ethenyl]-2-(4-hydroxyphenyl)-1-benzofuran-3-yl}-2-(4-hydroxyphenyl)-2,3-dihydro-1-benzofuran-3-yl)benzene-1,3-diol (1)
6-(16'-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-5,7',9',13'-tetramethyl-5'-oxaspiro[oxane-2,6'-pentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icosane]-15'-oloxy)-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
3-[({2-[(3-{[4-({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-1,2-dihydroxy-3,3-dimethylbutylidene]amino}-1-hydroxypropylidene)amino]ethyl}sulfanyl)carbonyl]-4-hydroxy-4-phenylbutanoic acid (1)
4-({[({[5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-2-hydroxy-N-[2-({2-[(11E)-icos-11-enoylsulfanyl]ethyl}-C-hydroxycarbonimidoyl)ethyl]-3,3-dimethylbutanimidic acid (1)
(1R,2R,3R,11S,12S,14R,26R)-5,6',7',12-tetrahydroxy-6-methoxy-7,21,30-trimethyl-27-oxo-3',4'-dihydro-2'H-17,19,28-trioxa-24-thia-13,30-diazaspiro[heptacyclo[12.9.6.1³,¹¹.0²,¹³.0⁴,⁹.0¹⁵,²³.0¹⁶,²⁰]triacontane-26,1'-isoquinoline]-4(9),5,7,15(23),16(20),21-hexaen-22-yl acetate (1)
Ps(14:1(9z)/20:5(5z,8z,11z,14z,17z)) (1)
2-[6'-(5,7-Dihydroxy-4-oxo-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4H-chromen-2-yl)-2',3',4,4',5,6-hexahydroxy-[1,1'-biphenyl]-2-yl]-5,7-dihydroxy-3,4-dihydro-2H-1-benzopyran-3-yl 3,4,5-trihydroxybenzoate (1)
Heptacosane-6,8-dione (1)
3,4,5-trihydroxy-6-{[5-hydroxy-14-(1-hydroxy-6-methylhept-5-en-2-yl)-2,11,15-trimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-en-8-yl]oxy}oxane-2-carboxylic acid (1)
2-[(7-{[4,5-dihydroxy-6-(hydroxymethyl)-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-5-hydroxy-2-(4-hydroxyphenyl)-4-oxo-4H-chromen-3-yl)oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl (2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate (1)
TG(15:0/22:5(4Z,7Z,10Z,13Z,16Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (1)
2-[2-({7-[(3-carboxy-3-{2-[(6-carboxy-3,4,5-trihydroxyoxan-2-yl)oxy]-2-oxoethyl}propanoyl)oxy]-11,16,18-trihydroxy-19-[(1-hydroxyethylidene)amino]-5,9-dimethylicosan-6-yl}oxy)-2-oxoethyl]butanedioic acid (1)
(6-{4-[2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran-8-yl]-3,5,7-trihydroxy-2-(3-hydroxyphenyl)-3,4-dihydro-2H-1-benzopyran-8-yl}-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl)oxidanesulfonic acid (1)
[6,7,8,11,12,13,23-heptahydroxy-3,16-dioxo-21-(3,4,5-trihydroxybenzoyloxy)-2,17,20-trioxatetracyclo[17.3.1.0⁴,⁹.0¹⁰,¹⁵]tricosa-4,6,8,10,12,14-hexaen-22-yl]oxidanesulfonic acid (1)
N-Isobutyl-2E,4Z-octadecadienoyl amine (1)
PA(O-16:0/18:0) (1)
TG(20:4(8Z,11Z,14Z,17Z)/20:5(5Z,8Z,11Z,14Z,17Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (1)
(4,5-dihydroxy-2-{[(1E)-3-hydroxy-3-methyl-1-[(sulfooxy)imino]pentyl]sulfanyl}-6-(hydroxymethyl)oxan-3-yl)oxidanesulfonic acid (1)

Study type

Transcription profiling by array (3)
RNA-seq of coding RNA (2)
Comparative genomic hybridization by array (1)

Release Date

2021 (84)
2022 (58)
2018 (55)
2020 (53)
2023 (52)
2024 (37)
2025 (35)
2015 (31)
2019 (27)
2016 (24)
2017 (22)
2014 (18)
2012 (16)
2013 (12)
2008 (8)
2009 (7)
2011 (6)
2010 (5)
2026 (2)
2005 (1)
2007 (1)
2006 (1)

Lab affiliation

University of Melbourne, Melbourne, Australia (1)

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Relative Exchangeable Copper, Exchangeable Copper and Total Copper in the Diagnosis of Wilson Disease.

Not available

S-EPMC11977851 | biostudies-literature

Metabolomic fingerprinting of bull spermatozoa for identification of fertility signature metabolites

The objective of the study was to identify the fertility-associated metabolites in bovine spermatozoa using liquid chromatography-mass spectrometry (LC-MS). Six Holstein Friesian crossbred bulls (three high-fertile and three low-fertile bulls) were the experimental animals. Sperm proteins were isola...

2021-12-07 | MTBLS1071 | MetaboLights

Rate of elongation by RNA polymerase II is influenced by specific gene features and histone modifications

The rate of transcription elongation plays important roles in the timing of expression of full-length transcripts as well as for the regulation of alternative splicing. In this study we coupled Bru-Seq technology with 5,6-dichlorobenzimidazole 1-M-NM-2-D-ribofuranoside (DRB) to estimate the elongati...

ORGANISM(S): Homo sapiens

2014-04-01 | E-GEOD-55534 | biostudies-arrayexpress

Elevated CO2 and virus infection impacts wheat and aphid metabolism

INTRODUCTION: The aphid Rhopalosiphum padi L. is a vector of Barley yellow dwarf virus (BYDV) in wheat and other economically important cereal crops. Increased atmospheric CO2 has been shown to alter plant growth and metabolism, enhancing BYDV disease in wheat. However, the bioch...

2019-01-16 | MTBLS622 | MetaboLights

Novel RNA-binding activity of MYF5 enhances Ccnd1/Cyclin D1 mRNA translation during myogenesis

Skeletal muscle contains long multinucleated and contractile structures known as muscle fibers, which arise from the fusion of myoblasts into nucleated myotubes during myogenesis. The myogenic regulatory factor (MRF) MYF5 is the earliest to be expressed during myogenesis and functions as a transcri...

ORGANISM(S): Mus musculus

2016-08-08 | E-GEOD-73704 | biostudies-arrayexpress

Ornithine Decarboxylase in Gastric Epithelial Cells Promotes the Immunopathogenesis of Helicobacter pylori Infection

Colonization by H. pylori is associated with a wide range of gastric diseases, ranging from superficial gastritis to more severe pathologies, including intestinal metaplasia and adenocarcinoma. The interplay of the host response and the pathogen affect the outcome of disease. One major component ...

2022-06-15 | MTBLS3235 | MetaboLights

Identifying transcription start sites and active enhancer elements using BruUV-seq

BruUV-seq utilizes UV light to introduce transcription-blocking DNA lesions randomly in the genome prior to bromouridine-labeling and deep sequencing of nascent RNA. By inhibiting transcription elongation, but not initiation, pre-treatment with UV light leads to a redistribution of transcription rea...

ORGANISM(S): Homo sapiens

2015-12-21 | E-GEOD-75398 | biostudies-arrayexpress

Structural and functional characterization of a multi-domain GH92 α-1,2-mannosidase from Neobacillus novalis.

Not available

S-EPMC10167667 | biostudies-literature

X- vs. Y-Chromosome Influences on Human Behavior: A Deep Phenotypic Comparison of Psychopathology in XXY and XYY Syndromes.

Not available

S-EPMC10371113 | biostudies-literature

X- vs. Y-chromosome influences on human behavior: a deep phenotypic comparison of psychopathology in XXY and XYY syndromes.

Not available

S-EPMC11451104 | biostudies-literature