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UnknownMolecular and kinetic comparison of the novel extended-spectrum beta-lactamases CTX-M-25 and CTX-M-26.
Not available
S-EPMC529179 | biostudies-literature
Proteomicsproteome of different mutant strains of M. pneumoniae
This project or dataset comprises raw data of the proteome of different mutant strains of M. pneumoniae (∆mpn453; ∆mpn372; CV2 (∆mpn133∆mpn372); CV0 (WT_gp35) and ∆mpn133).The proteome of the strain was used to corroborate the genotype of the obtained mutants and to discard unspected changes in the ...
ORGANISM(S): Mycoplasma pneumoniae (strain ATCC 29342 / M129) 
2021-09-14 | PXD028011 | Pride
Mpn133 Mpn453 Mutant Mpn372 Mycoplasma pneumoniae 
UnknownSingle-nucleotide m⁶A mapping uncovers redundant YTHDF function in planarian progenitor fate selection.
Not available
S-EPMC12864844 | biostudies-literature
ModelsKarim2021 - CardioTox net: Ligand-based prediction of hERG blockade
A robust predictor for hERG channel blockade based on an ensemble of five deep learning models. The authors have collected a dataset from public sources, such as BindingDB and ChEMBL on hERG blockers and non-blockers. The cut-off for hERG blockade was set at IC50 Model Type: Predictive machine lea...
2024-07-18 | MODEL2407180003 | BioModels
Machine Learning Model FAIR-AIML Ersilia 
TranscriptomicsExpression data from mouse B16-F10 cells exposed to hypoxic conditions in vitro.
Analysis of gene expression profile of B16-F10 murine melanoma cells exposed to hypoxic conditions (1% oxygen) or hypoxia mimicry (cobalt chloride) for 24 hours. Gene expression profiles were analyzed using MG-U74Av2 oligonucleotide microarrays. Data analysis revealed 2541 probesets (FDR<5%) for 1...
ORGANISM(S): Mus musculus 
2011-11-11 | E-GEOD-33607 | biostudies-arrayexpress
TranscriptomicsThe quantitative genetics of transcriptional variation in stickleback liver.
Total RNA was extracted from liver tissues of lab-reared threespine stickleback. First generation fish originating from the Baltic Sea near Helsinki (Finland) were bred using a paternal half-sib design. At 6 months individuals were randomly assigned to either a treatment or control group: the tem...
ORGANISM(S): Gasterosteus aculeatus 
2014-12-03 | E-MTAB-3098 | biostudies-arrayexpress
UnknownMosquito-Borne Viruses and Insect-Specific Viruses Revealed in Field-Collected Mosquitoes by a Monitoring Tool Adapted from a Microbial Detection Array.
Not available
S-EPMC6752009 | biostudies-literature
TranscriptomicsChIP-on-chip of OmpR binding in Salmonella enterica serovar Typhimurium strain SL1344 and E.scherichia coli strain CSH50 at pH 7 and pH 4.5 including analysis of OmpR binding in SL1344 in the absence and presence of novobiocin (25 M-NM-
OmpR is a DNA binding protein belonging to the OmpR/EnvZ two component system. This system is known to sense changes in osmolarity in Escherichia coli. Recently, OmpR in Salmonella enterica serovar Typhimurium was found to be activated by acidic pH and DNA relaxation. In this study, ChIP-on-chip wa...
ORGANISM(S): Escherichia coli K-12 
2014-03-27 | E-GEOD-49914 | biostudies-arrayexpress
TranscriptomicsPenicillium marneffei: Gene expression profiling of hyphal and yeast cells and during conidiation
Penicillium marneffei (Talaromyces marneffei) is an opportunistic human pathogen that can grow in a multicellular hyphal form at 25M-BM-0C or a unicellular fission yeast form at 37M-BM-0C, and can switch between these two forms in response to temperature. The yeast form is found in infected individu...
ORGANISM(S): Talaromyces marneffei 
2013-11-21 | E-GEOD-51109 | biostudies-arrayexpress
ProteomicsData in support of proteomics of EVs ámd mimetic vesicles from
Exosomes (EXOs) are a biological subset of extracellular vesicles of 50-200 nm in size which are released by most cells upon fusion of multivehicular bodies with plasma membrane.Mimetic-Nanovesicles (M-NVs) have higher yield compare to exosomes. In addition, M-NVs can untangle the difficulties assoc...
ORGANISM(S): Homo sapiens (Human) 
2022-01-05 | PXD010539 | Pride
Microvesicles proteomics 
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