Wong W W - OmicsDI

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Unknown (4355)
Transcriptomics (414)
Proteomics (143)
Genomics (107)
Metabolomics (14)
Models (1)
Genomic (1)

Organisms

Homo sapiens (286)
Mus musculus (139)
Saccharomyces cerevisiae (17)
Rattus norvegicus (16)
Arabidopsis thaliana (15)
Caenorhabditis elegans (8)
Danio rerio (8)
Gallus gallus (4)
Escherichia coli (3)
Schizosaccharomyces pombe (2)
Ovis aries (2)
Plasmodium falciparum (2)
Candida albicans (2)
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Escherichia coli K-12 (1)
Flaveria cronquistii (1)
Panagrellus redivivus (1)
Nostoc punctiforme PCC 73102 (1)
Amphimedon queenslandica (1)
Saccharomyces pastorianus Weihenstephan 34/70 (1)
Aspergillus flavus (1)
Human adenovirus 40 (1)
Viruses (1)
Actinosynnema pretiosum (1)
Lactuca sativa (1)
Leishmania major (1)
Macaca mulatta (1)
Pan troglodytes (1)
Chlamydomonas reinhardtii (1)
Nicotiana benthamiana (1)

Repository

biostudies-arrayexpress (448)
pride (109)
EGA (73)
MassIVE (17)
MetaboLights (14)
iProX (9)
PeptideAtlas (6)
jPOST (2)
BioModels (1)
dbGaP (1)
ENA (1)

Tissue

Cell culture (24)
Epithelial cell (16)
Blood (6)
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Kidney (5)
B cell (4)
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Heart (2)
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Podocyte (sensu Diptera) (2)
Prostate adenocarcinoma cell (2)
Root (2)
Vitreous humor (2)
Whole body (2)
Blood cell (1)
Bronchial epithelial cell (1)
Early embryonic cell (1)
Embryonic cell (1)
Embryonic stem cell (1)
Esophageal gland (1)
Extensor digitorum longus (1)

Disease

Colon cancer (9)
Disease free (6)
Normal (3)
Cystic fibrosis (3)
Multiple myeloma (3)
Prostate adenocarcinoma (3)
Breast cancer (2)
COVID-19 (2)
Malignant neoplasm of ovary (2)
Inoculated with P. syringae pv. tomato strain DC3000 + avrRps4 (1)
Lung Cancer (1)
Metastatic colorectal cancer (1)
Lymphoblastic leukemia (1)
Peripheral neuropathy (1)
Lung squamous cell carcinoma (1)
Prostate carcinoma (1)
Adenocarcinoma (1)
Acute leukemia (1)
Fabry disease (1)
Kabuki syndrome (1)
Lymphoma (1)
Mature T-cell and NK-cell lymphoma (1)
Mitochondrial metabolism disease (1)
Myopia (1)
Pancreatic ductal carcinoma (1)
Proliferative diabetic retinopathy (1)
Scoliosis (1)
Severe acute respiratory syndrome (1)
Skin melanoma (1)
Vascular dementia (1)

Technology Type

Mass Spectrometry (109)
Shotgun proteomics (63)
Affinity purification coupled with mass spectrometry proteomics (19)
Bottom-up proteomics (14)
Mass spectrometry (12)
Gel-based experiment (6)
Data-dependent acquisition (5)
SWATH MS (5)
Illumina HiSeq 2000 (4)
Data-independent acquisition (4)
Top-down proteomics (3)
Mass spectrometry assay (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
ILLUMINA, Illumina HiSeq 2500, HiSeq X Ten, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Illumina MiSeq, ILLUMINA (1)
Illumina HiSeq 2000, Illumina HiSeq 2500, ILLUMINA (1)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Affinity proteomics (1)
SRM/MRM (1)

Instrument Platform

NextSeq 500 (7)
Illumina HiSeq 2500 (6)
LTQ Orbitrap Elite (5)
TripleTOF 6600 (4)
Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - negative - reverse phase (4)
Q Exactive Plus (3)
Illumina NovaSeq X (2)
Illumina NovaSeq 6000 (2)
Illumina HiSeq 2000 (2)
Orbitrap Fusion Lumos (2)
Illumina HiSeq 2000 platform (1)
Agilent microarray Scanner (1)
Agilent Microarray Hybridization Chamber Kit and Hybridization oven rotator (1)
Agilent miRNA Complete Labeling and Hyb Kit (1)
Extraction kit (1)
Agilent Bioanalyzer (1)
Gene Titan (1)
GeneChip Scanner 3000 7G (1)
418 [Affymetrix] (1)
Affymetrix (1)
BGISEQ-500 (1)
Illumina HiSeq 3000 (1)
Illumina HiSeq 4000 (1)
6540 Q-TOF LC/MS (1)
Agilent 7890A GC with 5975C inert XL MSD (1)
LTQ Orbitrap Velos (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
TripleTOF 5600 (1)

Publication Date

2013 (65)
2011 (57)
2014 (47)
2012 (46)
2010 (46)
2008 (45)
2015 (40)
2022 (27)
2016 (27)
2009 (27)
2021 (25)
2019 (23)
2025 (20)
2023 (20)
2020 (18)
2024 (15)
2007 (13)
2026 (12)
2018 (9)
2017 (6)
2006 (6)
2005 (4)
2004 (2)

UNIPROT ID/AC

P0A9M8 (1)
P27550 (1)

CHEBI ID

CHEBI:37550 (4)
CHEBI:16467 (4)
CHEBI:17203 (4)
CHEBI:17012 (4)
CHEBI:16414 (4)
CHEBI:17191 (4)
CHEBI:17895 (4)
CHEBI:30769 (4)
CHEBI:28838 (3)
CHEBI:46171 (3)
CHEBI:17482 (3)
CHEBI:17033 (3)
CHEBI:28238 (3)
CHEBI:64032 (3)
CHEBI:16680 (3)
CHEBI:17126 (3)
CHEBI:16977 (3)
CHEBI:15746 (3)
CHEBI:60943 (3)
CHEBI:15428 (3)
CHEBI:28790 (3)
CHEBI:16566 (3)
CHEBI:17115 (3)
CHEBI:16335 (3)
CHEBI:7916 (3)
CHEBI:18019 (3)
CHEBI:15891 (3)
CHEBI:30089 (1)
CHEBI:15350 (1)
CHEBI:15351 (1)

Metabolite Name

9-Z-beta-carotene (2)
Zeaxanthin (2)
Chlorophylla b (2)
Lutein (2)
Antheraxanthin (2)
Lutein, 5-6 epoxide (2)
Violaxanthin (2)
Neoxanthin (2)
Beta-carotene (2)
Acylcarnitine 16:0 (2)
Acylcarnitine 4:0 (2)
PI 40:5 (2)
PI 32:1 (2)
PI 36:3 (2)
PI 36:2 (2)
PI 40:6 (2)
PI 36:4 (2)
PE 36:4 (2)
PE 40:6 (2)
PE 38:6 (2)
PE 38:3 (2)
PE 34:1 (2)
Gamma-tocopherol (2)
11b-Hydroxyprogesterone (2)
N-acetylputrescine (2)
Alpha-tocopherol (2)
Monoelaidin (2)
Acylcarnitine 5:0 (2)
1-Palmitoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (2)
Tryptophan (2)

IsPrivate

False (1)

First Public Date

2019 (1)

Modelling Approach

Ordinary differential equation model (1)

Modification

2x(15)N labeled L-lysine (2)
4x(15)N labeled L-arginine (2)
4x(2)H labeled dimethylated L-lysine (2)
Not available (2)
0.984016 (1)
14.01565 (1)
15.994915 (1)
19.989829 (1)
28.0313 (1)
3.994915 (1)
57.021464 (1)
N6 (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (311)
RNA-seq of coding RNA (37)
ChIP-seq (31)
Comparative genomic hybridization by array (9)
Methylation profiling by array (9)
RNA-seq of non coding RNA (8)
Unknown experiment type (5)
ChIP-chip by tiling array (4)
Other (4)
RNA-seq of coding RNA from single cells (4)
Animal - High-throughput sequencing (3)
RNAi profiling by array (3)
Genotyping by array (3)
Animal - One-color microarray (2)
MicroRNA profiling by array (2)
DNA-seq (2)
RNA-seq of non coding RNA from single cells (1)
Differential (1)
Human - Methylation microarray (1)
Cell line - One-color microarray (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
ChIP-chip by array (1)
Transcription profiling by RT-PCR (1)
MicroRNA profiling by high throughput sequencing (1)
ATAC-seq (1)

Release Date

2022 (521)
2023 (482)
2025 (473)
2021 (422)
2024 (402)
2020 (338)
2019 (270)
2018 (266)
2015 (236)
2016 (233)
2017 (218)
2014 (180)
2013 (154)
2012 (126)
2011 (125)
2010 (82)
2026 (66)
2009 (64)
2008 (56)
2006 (26)
2007 (21)
2005 (19)
2004 (7)
2003 (5)
1998 (3)
2001 (2)
2000 (2)
1999 (2)
1997 (2)

Lab affiliation

Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (7)
The University of Melbourne (4)
Dept. of Laboratory Medicine, University of California, San Francisco, CA (3)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology and Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Science. Guangzhou, China (2)
Chemical and Biological Engineering Department, The Hong Kong University of Science and Technology (HKUST) (2)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia (2)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia. (2)
Department of Medicine, Nephrology and Pharmacological Sciences, Icahn School of Medicine at Mount Sinai (2)
Division of Life Science, The Hong Kong University of Science and Technology, Hong Kong SAR, China (2)
Lee Kong Chian School of Medicine, School of Biological Sciences, Nanyang Technological University, Singapore (2)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland (2)
School of Biomedical Sciences, Faculty of Medicine and Health, UNSW Sydney (2)
School of Optometry, The Hong Kong Polytechnic University (2)
The Chinese University of Hong Kong (2)
1Department of Physiology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA (1)
Adult Cancer Program, Faculty of Medicine, Lowy Cancer Research Centre, University of New South Wales Sydney, NSW, Australia (1)
Allakos Inc. (1)
Associate Professor in the Department of Biosciences Durham University UK (1)
Australian Regenerative Medicine Institute, Monash University, Wellington Road, Clayton, VIC 3800, Australia (1)
Centenary Institute, Newtown, New South Wales, Australia (1)
Centre for Targeted Protein Degradation (CeTPD) University of Dundee (1)
Chair in Infection and Global Health, Department of Infection Biology, Institute of Infection and Global Health, University of Liverpool, (1)
Chemical Proteomics, Division of Chemistry I, MBB Dept., Biomedicum, Karolinska Insitute, Stockholm, Sweden (1)
Chief Scientific Officer oNKo-innate Pty Ltd Laboratory Head, Huntington Laboratory Monash Biomedicine Discovery Institute Monash University Victoria Australia (1)
Chinese Academy of Sciences Shanghai Institute of Materia Medica (1)
Clinical Reaseach center for Reproduction and Genetics in Hunan Province, Reproductive and Genetic Hospital of CITIC-XIANGYA, Changsha, Hunan, China (1)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (1)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany (1)
Department Biochemistry, Microbiology and Immunology, Ottawa Institute of Systems Biology, University of Ottawa (1)
Department for Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute, Germany (1)

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Nanoemulsion nasal adjuvant W₈₀5EC induces dendritic cell engulfment of antigen-primed epithelial cells.

Not available

S-EPMC3556236 | biostudies-literature

Rapid and simultaneous detection of Mycobacterium tuberculosis complex and Beijing/W genotype in sputum by an optimized DNA extraction protocol and a novel multiplex real-time PCR.

Not available

S-EPMC3147870 | biostudies-literature

Bcl-2, Bcl-x(L), and Bcl-w are not equivalent targets of ABT-737 and navitoclax (ABT-263) in lymphoid and leukemic cells.

Not available

S-EPMC3382939 | biostudies-literature

Transcription profiling of mouse dendritic cells from wild type, CIITA-/- and I-A beta -/- strains representing CIITA-deficient, MHC class II-deficient and control mice

Triplicates preparations of RNA from day 10 DC's. Experiment is described in Wong et al 2003 Nat. Immunol.

ORGANISM(S): Mus musculus

2007-12-13 | E-GEOD-557 | biostudies-arrayexpress

Function of a membrane-embedded domain evolutionarily multiplied in the GPI lipid anchor pathway proteins PIG-B, PIG-M, PIG-U, PIG-W, PIG-V, and PIG-Z.

Not available

S-EPMC6056205 | biostudies-literature

Persistent Type I Interferon Signaling in the Brain of People with HIV under ART with Cognitive Impairment

To examine the mechanisms that drive persistent neuroinflammation, we analyzed the proteome from 27 HIV-infected brains on antiretroviral therapy (ART) with different stages of HIV-associated neurocognitive disorders (HAND) by tandem mass tag quantitative proteomics. We observed that 73.3% of the up...

ORGANISM(S): Homo sapiens (Human)

2025-08-25 | PXD042550 | Pride

Medial Epicanthoplasty with the Skin-Redraping Technique: Technical Refinements for Predictable Outcomes.

Not available

S-EPMC11845064 | biostudies-literature

Transcription profiling of whole blood samples from humans with Immune Thrombocytopenic Purpura (ITP) and control patients

Five ITP and five control whole blood samples were collected with IRB approval. The age range of ITP patients was 1-54 years, and the range in platelet counts was 2,000-98,000 W 109/L. We examined only one ITP sample for antiplatelet antibodies, and found it to be positive. Total RNA was isolated fr...

ORGANISM(S): Homo sapiens

2006-09-18 | E-SMDB-3822 | biostudies-arrayexpress

Identifying Novel Small RNA Biomarkers for Patients with Gastric Cancer

The biomarker development study consisted of two parts: discovery and validation. The first part was the discovery and verification phase of biomarkers using two different platforms: transcriptomic and miRNA. The salivary transcriptomes of 63 GC samples and 31 non-GC controls were profiled using ...

phs001767 | dbGaP

microRNA expression of human periodontal ligament derived stem cell line exposed to 1 microMolar (uM) (-)-nicotine liquid or 1 uM nicotine electronic cigarette vapor extract against untreated control

Nicotine and cigarette smoking have been previously shown to inhibit the differentiation potential and miRNA expression of human periodontal ligament derived stem cells (PDLSCs). Electronic cigarette (EC) vapor also contains nicotine, as well as other non-nicotine compounds, and, like cigarette smok...

ORGANISM(S): Homo sapiens

2019-09-30 | E-MTAB-7893 | biostudies-arrayexpress

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