Xu Dong D - OmicsDI

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Unknown (1924)
Proteomics (65)
Transcriptomics (25)
Metabolomics (22)
Genomics (9)

Organisms

Homo sapiens (30)
Andropogon gerardi (26)
Bacteria (26)
Canis lupus familiaris (26)
Cnidaria (26)
Cricetulus griseus (26)
Eukaryota (26)
Fasciola (26)
Hepatitis B virus (26)
Human alphaherpesvirus 1 strain 17 (26)
Human betaherpesvirus 5 (26)
Madurella mycetomatis (26)
Mesocricetus auratus (26)
Miscanthus x giganteus (26)
Mus musculus (26)
Mus musculus (16)
Clostridium acetobutylicum (3)
Ovis aries (3)
Arabidopsis thaliana (2)
Rattus norvegicus (2)
Drosophila melanogaster (2)
Macaca fascicularis fascicularis (2)
Bradyrhizobium diazoefficiens USDA 110 (1)
Brassica oleracea (1)
Capra hircus (1)
Brassica rapa subsp. pekinensis (1)
Glycine max (1)
Escherichia coli (1)
Gallus gallus (1)
Spodoptera frugiperda (1)

Repository

iProX (30)
biostudies-arrayexpress (28)
pride (26)
MetaboLights (19)
MassIVE (9)
EGA (6)
GNPS (3)

Tissue

Cell culture (9)
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Lung (2)
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Blood cell (1)
Blood plasma (1)
Blood platelet (1)
Extracellular vesicle (1)
Neural progenitor cell (1)
Permanent cell line cell (1)

Disease

Cervix carcinoma (1)
Colon cancer (1)
Disease free (1)
Liver cancer (1)
Mixed disorder as reaction to stress (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (26)
Mass spectrometry (16)
Shotgun proteomics (15)
Affinity purification coupled with mass spectrometry proteomics (4)
Mass spectrometry assay (2)
Data-independent acquisition (2)
Mass spectrometry imaging (2)
NMR spectroscopy (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (6)
Orbitrap Fusion Lumos (4)
Liquid Chromatography MS - positive - hilic (4)
Liquid Chromatography MS - negative - hilic (3)
Agilent 5975C Series GC/MSD (2)
Liquid Chromatography MS - - reverse phase (2)
6540 Q-TOF LC/MS (Agilent) (2)
Liquid Chromatography MS - (2)
NextSeq 2000 (1)
Illumina HiSeq 2500 (1)
Orbitrap Exploris 480 (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Q Exactive (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
Q Exactive Plus (1)
6530 Q-TOF LC/MS (Agilent) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2023 (13)
2015 (11)
2022 (10)
2025 (9)
2021 (9)
2024 (8)
2014 (7)
2017 (6)
2013 (5)
2020 (5)
2016 (4)
2019 (4)
2018 (4)
2012 (3)
2010 (1)
2008 (1)

CHEBI ID

CHEBI:16708 (7)
CHEBI:16704 (7)
CHEBI:32816 (7)
CHEBI:15354 (7)
CHEBI:17368 (7)
CHEBI:30769 (7)
CHEBI:18237 (6)
CHEBI:18186 (6)
CHEBI:16750 (6)
CHEBI:16870 (6)
CHEBI:15428 (6)
CHEBI:16610 (6)
CHEBI:6650 (6)
CHEBI:17154 (6)
CHEBI:27266 (6)
CHEBI:15603 (6)
CHEBI:17596 (6)
CHEBI:28997 (5)
CHEBI:17992 (5)
CHEBI:16709 (5)
CHEBI:17858 (5)
CHEBI:16856 (5)
CHEBI:16040 (5)
CHEBI:22660 (5)
CHEBI:22653 (5)
CHEBI:28300 (5)
CHEBI:17533 (5)
CHEBI:17752 (5)
CHEBI:17562 (5)
CHEBI:15741 (5)

Metabolite Name

N6-Acetyl-L-lysine (4)
4-Pyridoxic acid (4)
Uridine (4)
Pyruvic acid (3)
Leucine (3)
Carnitine (3)
Valine (3)
Xanthurenic acid (3)
Indole-3-carboxylic acid (3)
Nicotinamide (3)
Methionine sulfoxide (3)
Tyrosine (3)
Adenosine (3)
N-Acetylputrescine (3)
Phenylalanine (3)
Glutamine (3)
Adenine (3)
Methylmalonic acid (3)
Cytidine (3)
Urea (3)
Inosine (3)
Hypoxanthine (3)
Cysteine sulfinate (2)
5-phosphoribosyl-1-pyrophosphate (2)
2-ketohaxanoic acid (2)
2-Amino-1,3-eicosanediol (2)
UDP-xylose (2)
1-Linoleoylglycerol (2)
N-acetyl-L-aspartylglutamic acid (2)
HMG-CoA (2)

Study type

Transcription profiling by array (13)
RNA-seq of coding RNA (10)
ChIP-seq (2)
Unknown experiment type (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2025 (331)
2023 (262)
2024 (260)
2022 (254)
2021 (176)
2020 (149)
2019 (109)
2015 (71)
2017 (67)
2018 (59)
2026 (48)
2016 (43)
2014 (36)
2013 (30)
2012 (23)
2011 (8)
2010 (7)
2009 (6)
2006 (4)
2008 (3)
2005 (2)
2007 (1)
2003 (1)
2002 (1)

Lab affiliation

Ottawa Institute of Systems Biology and Department of Biochemistry, Microbiology and Immunology, Faculty of Medicine, University of Ottawa, Ottawa, Ontario, Canada (2)
State Key Lab of Reproductive Medicine, Nanjing Medical University (2)
Beijing Institute of Genomics, Chinese Academy of Sciences (1)
Beijing Key Laboratory for Radiobiology, Beijing Institute of Radiation Medicine, Beijing 100850, P.R. China (1)
Brain Tumor Center, Division of Experimental Hematology and Cancer Biology, Cincinnati Children’s Hospital Medical Center, Cincinnati, OH 45229, USA (1)
Chinese Academy of Fishery Sciences (1)
Chinese Academy of Sciences University,Center for Excellence in Molecular & Cellular Sciences, State Key Laboratory of Molecular Biology, Institute of Biochemistry & Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Rd., Shanghai, China 200031 (1)
Department of Biology, Henan University, Kaifeng 475001, The Peoples Republic of China. (1)
Department of Liver Surgery and Transplantation, Liver Cancer Institute, Zhongshan Hospital, Fudan University; Key Laboratory of Carcinogenesis and Cancer Invasion of Ministry of Education, Key Laboratory of Medical Epigenetics and Metabolism, Institutes of Biomedical Sciences, Fudan University, Shanghai 200032, China (1)
Department of Respiratory, Shandong Provincial Qianfoshan Hospital, Cheeloo College of Medicine, Shandong University, Jinan, China. Department of Respiratory, The First Affiliated Hospital of Shandong First Medical University & Shandong Provincial Qianfoshan Hospital, Shandong Institute of Respiratory Diseases. (1)
GIBH (1)
Guangzhou Institute of Pediatrics, Guangzhou Women and Children’s Medical Center, Guangzhou Medical University, Guangzhou, 510623, China (1)
Guangzhou National Laboratory, Guangzhou 510005, Guangdong Province, China (1)
Laboratory of Vaccine and Antibody Engineering, Beijing Institute of Biotechnology, Beijing, China (1)
National Institute of Biological Sciences, Beijing, Beijing, China. (1)
Nephrology Department of Guilin No.924 Hospital, Guangxi Key Laboratory of Metabolic Diseases Research, Guilin Key laboratory of Kidney Diseases Research; Clinical Medical Research Center, The Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital) (1)
Nurturing Station for the State Key Laboratory of Subtropical Silviculture, Zhejiang A 20 & F University, Dong Hu Campus, 88 Northern Circle Road, Linan 311300, China. (1)
Soochow University (1)
State Key Laboratory Cultivation Base for Cell Differentiation Regulation, Henan Normal University, Xinxiang, Henan Province, China (1)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics an Developmental Biology, Chinese Academy of Sciences (1)
The Key Laboratory for Human Disease Gene Study of Sichuan Province and the Department of Laboratory Medicine, Sichuan Provincial People's Hospital, University of Electronic Science and Technology of China, Chengdu, China (1)
Translational Biomedical Proteomics, Institute of Molecular and Cell Biology (IMCB), Singapore (1)
University/Hospital: the Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital) Street Name & Number: No. 1017, North of Dongmen Road, Shenzhen City, Guangdong Province 518020, China (1)
Wuhan University (1)

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Evaluation of anthropometric indices as a predictor of diabetes in Dong and Miao ethnicities in China: A cross-sectional analysis of China Multi-Ethnic Cohort Study.

Not available

S-EPMC8916665 | biostudies-literature

Comprehensive analyses of genetic diversities and population structure of the Guizhou Dong group based on 44 Y-markers.

Not available

S-EPMC10538297 | biostudies-literature

Effect of Electropulsing Current Density on the Strength-Ductility Synergy of Extruded Mg-6Al-1Zn Alloy.

Not available

S-EPMC11857845 | biostudies-literature

Proteomic response of Saccharina japonica to ocean acidification

We used proteomic analysis to reveal molecular response of Saccharina japonica to the projected ocean acidification conditions.

ORGANISM(S): Saccharina japonica

2018-10-15 | PXD011219 | Pride

Quantitative analysis to the subcellular proteome in response to cathepsin D knockdown in HeLa cells

Cathepsin D is reportedly to be closely associated with tumor development, migration and invasion, but its pathological mechanism is not fully elucidated. We aimed to evaluate phenotypic changes and molecular events in response to cathepsin D knockdown. Lowering endogenous cathepsin D abundance (CR)...

ORGANISM(S): Homo sapiens (Human)

2015-12-17 | PXD002844 | Pride

Cytosol Lysosome Silac Nucleus Subcellular fractionation

Facilitation of MrgprD by TRP-A1 promotes neuropathic pain.

Not available

S-EPMC6988841 | biostudies-literature

Effect and mechanism of vitamin D activation disorder on liver fibrosis in biliary atresia.

Not available

S-EPMC8494743 | biostudies-literature

Antitumor and Antibacterial Derivatives of Oridonin: A Main Composition of Dong-Ling-Cao.

Not available

S-EPMC6272837 | biostudies-literature