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ProteomicsGlobal landscape of protein phosphorylation during plant regeneration initiation in cotton (Gossypium hirsutum L.)
Phosphorylation is one of the most common post-translational modifications and is central to many cellular signaling events; however, little is currently known about the phosphorylation landscape during somatic embryogenesis (SE) for plant regeneration. Here, we systematically analyzed the phosphopr...
ORGANISM(S): Gossypium hirsutum 
2025-03-18 | PXD061812 | Pride
Cotton (gossypium hirsutum l.)  phosphoproteomics  embryogenic differentiation  plant regeneration initiation 
TranscriptomicsA global analysis of QTLs for expression variations in rice flag leaf at heading date
Analyses of QTLs for expression levels (eQTLs) of the genes reveal genetic relationship between expression variation and the regulator, thus unlocking the information for identifying the regulatory network. In this study, we used Affymetrix GeneChip Rice Genome Array to analyze eQTLs in rice flag le...
ORGANISM(S): Oryza sativa 
2014-02-05 | E-GEOD-49020 | biostudies-arrayexpress
TranscriptomicsA global analysis of QTLs for expression variations in rice shoot at early seedling stage
Analyses of QTLs for expression levels (eQTLs) of the genes reveal genetic relationship between expression variation and the regulator, thus unlocking the information for identifying the regulatory network. Oligo-nucleotide expression microarrays hybridized with RNA can simultaneously provide data f...
ORGANISM(S): Oryza sativa Indica Group 
2011-06-24 | E-GEOD-22564 | biostudies-arrayexpress
MetabolomicsMetabolomic analysis of alfalfa (Medicago sativa L.) root-symbiotic rhizobia responses under alkali stress
Alkaline salts (e.g., NaHCO3 and Na2CO3) causes more severe morphological and physiological damage to plants than neutral salts (e.g., NaCl and Na2SO4) due to differences in pH. The mechanism by which plants respond to alkali stress is not fully understood, especially in plants having symbotic relat...
2018-07-27 | MTBLS481 | MetaboLights
ProteomicsThe key clock component ZEITLUPE negatively regulates ABA signalling by degradation of the chloroplast outer membrane-localized CHLH/ABAR in Arabidopsis
Firstly, we immunoprecipitated the ZTL protein in ZTL-overexpressing plants (with a YFP tag at the C-terminus of ZTL). Then, the total proteins were identified by MS.
ORGANISM(S): Arabidopsis Thaliana 
2021-10-13 | PXD029110 |
ProteomicsAnalysis of protein interaction between human platelets and SARS-CoV-2 envelope protein
Analysis of protein interaction between platelets and SARS-CoV-2 envelope protein
ORGANISM(S): Homo Sapiens Severe Acute Respiratory Syndrome Coronavirus 2 
2023-08-08 | PXD037073 |
ProteomicsPRMT3 reverses HIV-1 latency by increasing chromatin accessibility to form a TEAD4-P-TEFb-containing transcriptional hub
A major challenge to the current efforts to cure HIV-1 infection is the persistence of latent viruses. Addressing this challenge hinges on unraveling the intricate interplay between the host and viral factors that are key for HIV-1 latency. Current antiretroviral agents effectively prevent actively ...
ORGANISM(S): Homo Sapiens 
2025-03-25 | PXD062187 |
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