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ProteomicsHistone Lysine β-Hydroxybutyrylation Regulates Drought Response in Rice
Protein post-translational modifications (PTMs), such as acetylation and methylation, are established as crucial epigenetic marks in eukaryotic cells. Recent advances in mass spectrometry have led to the discovery of novel PTMs, including crotonylation, 2-hydroxyisobutyrylation, β-hydroxybutyrylatio...
ORGANISM(S): Oryza sativa (Rice) 
2026-03-09 | PXD059711 | Pride
Rice  histone  lysine β-hydroxybutyrylation  epigenetics 
ProteomicsHistone Lysine β-Hydroxybutyrylation Regulates Drought Response in Rice
Protein post-translational modifications (PTMs), such as acetylation and methylation, are established as crucial epigenetic marks in eukaryotic cells. Recent advances in mass spectrometry have led to the discovery of novel PTMs, including crotonylation, 2-hydroxyisobutyrylation, β-hydroxybutyrylatio...
ORGANISM(S): Oryza sativa (Rice) 
2026-03-09 | PXD059709 | Pride
Rice  histone  lysine β-hydroxybutyrylation  epigenetics 
ProteomicsProteomic Insights into Rice Protein Palmitoylation and Its Role in Cytosolic Translation
Protein palmitoylation, also known as S-acylation, is a reversible post-translational modification in which fatty acids are covalently attached to cysteine residues via thioester bonds. To date, protein palmitoylation has been well studied in animal cells, where it plays a crucial role in regulating...
ORGANISM(S): Oryza sativa (Rice) 
2026-02-13 | PXD060133 | Pride
Rice ribo-seq  palmitoylation  translation 
ProteomicsA Redox-Dependent Pathway for Regulating Reversible HDACs Synchronizes Crown Root Development in Rice
As a signal molecular in aerobic organism, how reactive oxygen species (ROS) regulates normal life is a fundamental biological question. Locally accumulated ROS have been reported to balance cell division and differentiation in root apical meristem. However, the underlying molecular mechanism is unc...
ORGANISM(S): Oryza sativa (Rice) 
2022-08-10 | PXD029260 | Pride
Acetylome ros rice root hdac wox11 
ProteomicsProteomic Insights into Rice Protein Palmitoylation and Its Role in Cytosolic Translation
Protein palmitoylation, also known as S-acylation, is a reversible post-translational modification in which fatty acids are covalently attached to cysteine residues via thioester bonds. To date, protein palmitoylation has been well studied in animal cells, where it plays a crucial role in regulating...
ORGANISM(S): Oryza sativa (Rice) 
2026-02-11 | PXD073446 | Pride
Rice ribo-seq  palmitoylation  translation 
ProteomicsHDA714 is a versatile protein lysine deacetylase regulating metabolic and translational activities
The rice genome encodes 18 HDACs from the three different families. The RPD3 family comprises 14 genes, the HDT and the Sir families contain each 2 genes. Previous studies showed that rice RPD3 members are involved in various developmental processes. In this work, we used quantitative proteomics to ...
ORGANISM(S): Oryza sativa (Rice) 
2021-03-24 | PXD014063 | Pride
Rice  acetylation  histone deacetylase  ribo_seq 
ProteomicsHistone lysine acetylation, butyrylation, and crotonylation dynamics and functional interplay in rice under starvation and submergence
Histone lysine acylations are regulated by primary metabolism in animal cells. However, histone non-acetyl acylation is not yet studied in plants that have distinct primary metabolic pathways. In this work, we detected rice histone lysine butyrylation (Kbu) and crotonylation (Kcr) sites by mass spec...
ORGANISM(S): Oryza sativa (Rice) 
2018-09-06 | PXD009091 | Pride
Crotonylation Butyrylation Histone Rice 
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