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GenomicsSearching for variants associated with endometriosis
We explored regulatory mechanism of a SNP on chromosome 9p21 associated with endometriosis by leveraging “allele-specific” functional genomic approaches. By re-sequencing 1.29 Mb of 9p21 region and scrutinizing DNase-seq data from the ENCODE project, we prioritized rs17761446 as a candidate function...
EGAS00001001741 | EGA
Genomicsena-DATASET-NIG-07-03-2016-14:49:59:413-12 - samples
We performed target re-sequencing for 1.29 Mb interval of chromosome 9 (chr9:21299764–22590271, hg19). NimbleGen SeqCap EZ choice system was used as a target enrichment method (Roche Diagnostics). A DNA probe set complementary to the target region was designed by NimbleDesign. The libraries were seq...
EGAD00001001942 | EGA
GenomicsData Access Committee of National Institute of Genetics of Japan
Data Access Committee EGAC00001000448
EGAC00001000448 | EGA
TranscriptomicsTranscription profiling of human ulcerative colitis samples to develop a molecular marker
Samples were taken from either surgically resected specimens or during surveillance colonoscopic examination. The expression profiles were determined using Affymetrix Human Genome U133 Plus 2.0 arrays. Comparison between the sample groups allow to identify a set of discriminating genes that can be u...
ORGANISM(S): Homo sapiens 
2008-06-12 | E-GEOD-3629 | biostudies-arrayexpress
UnknownImpact of the COVID-19 pandemic on migraine in Japan: a multicentre cross-sectional study.
Not available
S-EPMC8182734 | biostudies-literature
ProteomicsFFPE proteome analysis of non-cancer lesion of renal cell carcinoma
To extract the molecules that correlate with kidney function and fibrosis, we performed the proteome analysis of non-cancer lesion of renal cell carcinoma in 16 patients. Proteins were extracted from FFPE slice samples and digested using the SP3 method as previously described. The digested peptide s...
ORGANISM(S): Homo Sapiens (human) 
2025-10-21 | PXD060453 | JPOST Repository
UnknownEfficacy of intraoperative irrigation with artificial cerebrospinal fluid in chronic subdural hematoma surgery: study protocol for a multicenter randomized controlled trial.
Not available
S-EPMC10759626 | biostudies-literature
ProteomicsHFpEF model heart failure mouse treated with traditional herbal medicine Goreisan
In this project we aimed to investigate the effect of Goreisan (GRS, traditional herbal medicine) on HFpEF model heart failure mouse. HFpEF was induced by administration of high-fat diet (HFD)and N-nitro-L-arginine methyl ester (L-NAME), with or without GRS. Mouse heart proteome was analyzed with LC...
ORGANISM(S): Mus Musculus (mouse) 
2025-09-02 | PXD049259 | JPOST Repository
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