Yang Jun J - OmicsDI

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Unknown (5510)
Proteomics (134)
Transcriptomics (87)
Metabolomics (68)
Genomics (21)
Other (2)
Models (1)

Organisms

Homo sapiens (97)
Mus musculus (37)
Rattus norvegicus (5)
Manihot esculenta (4)
Arabidopsis thaliana (3)
Drosophila melanogaster (3)
Macaca mulatta (2)
Oryctolagus cuniculus (2)
Tardigrada (2)
Rattus rattus (2)
Streptomyces avermitilis (1)
Camponotus floridanus (1)
Harpegnathos saltator (1)
Bombyx mori (1)
Salmonella enterica subsp. enterica serovar Typhi (1)
Plasmodium falciparum 3D7 (1)
Bos taurus (1)
Heterocephalus glaber (1)
Ovis aries (1)
Pyricularia oryzae P131 (1)
Magnaporthe (1)
Populus deltoides (1)
Cordyceps militaris CM01 (1)
Capsella rubella (1)
Canis lupus familiaris (1)
Aspergillus flavus NRRL3357 (1)
Clostridioides difficile ATCC 9689 = DSM 1296 (1)
Clostridioides difficile 70-100-2010 (1)
Caenorhabditis elegans (1)
Escherichia coli (1)

Organisms

Rattus norvegicus (1)
Mus musculus (1)

Repository

biostudies-arrayexpress (88)
iProX (87)
MetaboLights (68)
pride (31)
EGA (16)
MassIVE (13)
jPOST (3)
geo (2)
GPMDB (2)
ENA (2)
Cell Collective (1)

Tissue

Cell culture (9)
Brain (3)
Leaf (3)
Heart (2)
Hepatocyte (2)
Liver (2)
Smooth muscle cell of bladder (1)
Umbilical cord (1)
Skin mucus (1)
Cerebellum (1)
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Bone marrow (1)
Blood plasma (1)
Stem cell (1)
Primary cell (1)
Lung (1)
Permanent cell line cell (1)
Kidney (1)

Disease

Not Available (2)
Type 2 diabetes mellitus (2)
Aviremic HIV (1)
Brain glioblastoma multiforme (1)
Melanoma (1)
Breast cancer (1)

Technology Type

Mass spectrometry (60)
Mass Spectrometry (31)
Shotgun proteomics (18)
Mass spectrometry assay (5)
NMR spectroscopy (4)
Bottom-up proteomics (4)
Gel-based experiment (3)
Affinity purification coupled with mass spectrometry proteomics (3)
Affymetrix/Illumina (1)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Olink affinity proteomics (1)
Mass spectrometry imaging (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (36)
Liquid Chromatography MS - negative - reverse phase (25)
Liquid Chromatography MS - positive - hilic (15)
Liquid Chromatography MS - negative - hilic (13)
Q Exactive (4)
Q Exactive HF-X (3)
Illumina HiSeq 4000 (2)
Instrument (2)
Orbitrap Fusion (2)
Orbitrap Fusion Lumos (2)
Gas Chromatography MS - (2)
Gas Chromatography MS - positive (2)
Nuclear Magnetic Resonance (NMR) (2)
6540 Q-TOF LC/MS (Agilent) (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive (2)
Velos Plus (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos Pro (1)
Q Exactive Plus (1)
Orbitrap Exploris 480 (1)
MALDI MS (Imaging MS) (1)
LMJ-SSP/ESI MS (Imaging MS) (1)
Liquid Chromatography MS – negative - reverse phase (1)
Varian (1)
PTR-MS (1)
Tandem Gas Chromatography MS - positive (1)
7000C Triple Quadrupole GC/MS (Agilent) (1)
Direct infusion MS - negative (1)
Flame ionisation detector MS - (1)

Publication Date

2022 (32)
2010 (30)
2023 (30)
2021 (22)
2024 (19)
2019 (11)
2014 (11)
2008 (11)
2025 (11)
2017 (10)
2013 (9)
2009 (8)
2016 (7)
2011 (7)
2020 (7)
2026 (6)
2015 (5)
2018 (4)
2012 (3)
2005 (2)
2007 (1)
2004 (1)

CHEBI ID

CHEBI:30769 (27)
CHEBI:16750 (26)
CHEBI:17596 (26)
CHEBI:17368 (26)
CHEBI:16335 (25)
CHEBI:16704 (23)
CHEBI:17895 (23)
CHEBI:15756 (23)
CHEBI:17568 (22)
CHEBI:17509 (22)
CHEBI:15891 (22)
CHEBI:16708 (21)
CHEBI:17154 (21)
CHEBI:16196 (21)
CHEBI:7916 (20)
CHEBI:16027 (20)
CHEBI:17295 (20)
CHEBI:17351 (20)
CHEBI:16467 (19)
CHEBI:16737 (19)
CHEBI:15354 (19)
CHEBI:16828 (19)
CHEBI:17858 (18)
CHEBI:15741 (18)
CHEBI:17015 (18)
CHEBI:17203 (18)
CHEBI:16919 (18)
CHEBI:16347 (18)
CHEBI:16856 (17)
CHEBI:28044 (17)

Metabolite Name

Adenosine (17)
Taurine (16)
Adenine (14)
Guanosine (14)
Uridine (14)
Uracil (13)
Hypoxanthine (13)
Cholic acid (12)
Inosine (12)
L-Arginine (11)
Citric acid (11)
Uric acid (11)
Xanthine (11)
Creatinine (11)
L-Tyrosine (11)
L-Proline (10)
Palmitic acid (10)
Glutathione (9)
Ornithine (9)
Xanthosine (9)
Linoleic acid (9)
L-Glutamine (9)
Cytidine (9)
Thymidine (9)
L-Carnitine (9)
L-Leucine (9)
L-Methionine (9)
L-Phenylalanine (9)
Myristoleic acid (8)
Benzaldehyde (8)

First Public Date

2014 (2)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (41)
Unknown experiment type (20)
RNA-seq of coding RNA (16)
Transcription profiling by SAGE (2)
ChIP-chip by tiling array (2)
ChIP-seq (2)
RNA-seq of non coding RNA (2)
Transcription profiling by tiling array (1)
Comparative genomic hybridization by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (800)
2023 (758)
2021 (668)
2024 (564)
2025 (497)
2020 (477)
2019 (364)
2018 (284)
2017 (248)
2016 (236)
2015 (145)
2014 (144)
2010 (70)
2011 (65)
2013 (64)
2012 (57)
2009 (42)
2008 (33)
2007 (20)
2026 (20)
2006 (19)
2005 (6)
2004 (5)
2003 (3)
2001 (3)
2000 (3)
2002 (2)
1999 (1)

Lab affiliation

Institute of Reproductive Medicine, Medical School, Nantong University, Nantong 226001, China (2)
College of Biology, Hunan University, China (2)
School of Pharmaceutical Sciences, Fujian Provincial Key Laboratory of Innovative Drug Target Research and Center for Stress Signaling Networks, Xiamen University, Xiamen, Fujian 361102, China (1)
State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agroproducts, Key Laboratory of Biotechnology in Plant Protection of MOA of China and Institute of Plant Virology, Ningbo University, Ningbo, 315211, China (1)
Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Ministry of Agriculture, Guangzhou, China. (1)
National Bioenergy Center (1)
Department of Biology, Brain Research Center, Southern University of Science and Technology (1)
Institute of Biotechnology, Fujian Academy of Agricultural Sciences, China; (1)
Department of Cardiology, Chengdu Third People’s Hospital/Affiliated Hospital of Southwest Jiaotong University, Chengdu, China. (1)
MOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China (1)
School of Mathematics and Statistics, Faculty of Science, University of New South Wales, Kensington, NSW, Australia (1)
Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University (1)
State key Laboratory of Cellular Stress Biology,School of Pharmaceutical Sciences, Xiamen University,China (1)
Ningbo University (1)
Shandong Normal University (1)
Cancer Center of Union Hospital, Tongji Medical College,Huazhong University of Science and Technology (1)
Stony Brook University (1)
Ludwig Institute for Cancer Research, University of California San Diego, CA. Moores Cancer Center, UCSD School of Medicine, La Jolla, CA. Department of Pathology, UCSD School of Medicine, La Jolla, CA (1)
Department of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, 34141, South Korea KAIST Stem Cell Center, KAIST, Daejeon 34141, South Korea (1)
School of Life Science, Gwangju Institute of Science and Technology, Cheomdangwagiro123, Buk-gu, Gwangju, 61005, Republic of Korea (1)
Sun Yat-sen University (1)
Institute of Biological Chemistry, Taipei, Taiwan (1)
Ningxia Medical University (1)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (1)
1 Key Laboratory of Protein and Peptide Pharmaceuticals & Laboratory of Proteomics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China 2 University of Chinese Academy of Sciences, Beijing 100049, China (1)
State Key Laboratory of Animal Nutrition, Beijing Engineering Technology Research Center of Raw Milk Quality and Safety Control, College of Animal Science and Technology, China Agricultural University, Beijing, P. R. China (1)
Pacific Northwest National Laboratory, USA (1)
MOE Laboratory of Biosystems Homeostasis and Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University, Hangzhou, China (1)
Key Laboratory of Protein and Peptide Pharmaceuticals & Laboratory of Proteomics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China (1)

Tags

xref:PubMed:16098828 (1)
xref:PubMed:15150374 (1)

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The AP-1 Transcription Factor c-Jun Prevents Stress-Imposed Maladaptive Remodeling of the Heart

Systemic hypertension increases cardiac workload and subsequently induces signaling networks in heart that underlie myocyte growth (hypertrophic response) through expansion of sarcomeres with the aim to increase contractility. However, conditions of increased workload can induce both adaptive and ma...

ORGANISM(S): Mus musculus

2013-09-19 | E-GEOD-47898 | biostudies-arrayexpress

Gene regulation by the RcsCB two-component system and the auxiliary protein TviA in S. Typhi

In response to osmolarity, Salmonella enterica serotype Typhi (S. Typhi) regulates genes required for Vi capsular antigen expression oppositely to those required for motility and invasion. Previous studies suggest that osmoregulation of motility, invasion and capsule expression is mediated through t...

ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhi

2010-05-18 | E-GEOD-15752 | biostudies-arrayexpress

Differential role of sphingomyelin in influenza virus, rhinovirus and SARS-CoV-2 infection of Calu-3 cells

Host cell lipids play a pivotal role in the pathogenesis of respiratory virus infection. However, a direct comparison of the lipidomic profile of influenza virus and rhinovirus infections is lacking. In this study, we first compared the lipid profile of influenza virus and rhinovirus infection in a ...

2022-11-15 | MTBLS2352 | MetaboLights

Metabolite signatures of diverse Camellia sinensis tea populations

Tea plants (Camellia sinensis) present an excellent system to study evolution and diversification of specialized metabolites due to their abundance in classes, numbers and contents. A large number of tea cultivars have been cultivated throughout the world not only because of their adaption to differ...

2020-10-05 | MTBLS1405 | MetaboLights

Multimetric structural covariance in first-episode major depressive disorder: a graph theoretical analysis.

Not available

S-EPMC9074807 | biostudies-literature

Ubiquitin-Specific Protease USP6 Regulates the Stability of the c-Jun Protein.

Not available

S-EPMC5748463 | biostudies-literature

Yin Yang 1 promotes mTORC2-mediated AKT phosphorylation.

Not available

S-EPMC5007621 | biostudies-literature

Inherited NUDT15 variant is a genetic determinant of mercaptopurine intolerance in children with acute lymphoblastic leukemia.

Not available

S-EPMC4375304 | biostudies-literature

Expression analysis of Streptomyces avermitilis NRRL8165 delta-aveI mutant

Investigation of whole genome gene expression level changes in Streptomyces avermitilis delta-aveI mutant, compared to the wild-type strain. The mutants analyzed in this study are further described in Chen L, Lu Y., Chen J, Zhang W, Shu D, Qin Z, Yang S, Jiang W. (2008) Characterization of a negativ...

ORGANISM(S): Streptomyces avermitilis

2010-05-16 | E-GEOD-16892 | biostudies-arrayexpress

Genome-scale screens identify JNK-JUN signaling as a barrier for pluripotency exit and endoderm differentiation.

Not available

S-EPMC6545159 | biostudies-literature

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5823 Results

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