Yang Liu L - OmicsDI

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Unknown (27851)
Proteomics (725)
Transcriptomics (292)
Metabolomics (120)
Genomics (37)
Multiomics (8)
Models (2)
Other (1)

Organisms

Homo sapiens (329)
Mus musculus (151)
Arabidopsis thaliana (12)
Zea mays (9)
Rattus norvegicus (9)
Gallus gallus (6)
Oryza sativa (6)
Drosophila melanogaster (6)
Macaca mulatta (5)
Danio rerio (5)
Sus scrofa (4)
Ovis aries (4)
Gossypium hirsutum (3)
Sorghum propinquum (2)
Haloferax mediterranei (2)
Cucumis sativus (2)
uncultured bacterium (2)
Staphylococcus epidermidis (2)
Oryza sativa Indica Group (2)
Saccharomyces cerevisiae (2)
Manihot esculenta (2)
(Populus tomentosa x Populus bolleana) x Populus tomentosa (1)
Nannospalax galili (1)
Dugesia japonica (1)
Rhodococcus opacus (1)
Metarhizium robertsii (1)
Bos grunniens (1)
Ketogulonicigenium vulgare (1)
Brassica oleracea (1)
Schistosoma japonicum (1)

Organisms

gut metagenome (1)
Mus musculus (1)

Repository

pride (371)
biostudies-arrayexpress (303)
iProX (292)
MetaboLights (115)
MassIVE (39)
EGA (22)
PeptideAtlas (18)
GNPS (5)
jPOST (4)
ENA (3)
BioModels (1)
Cell Collective (1)
geo (1)
GPMDB (1)
PAXDB (1)

Tissue

Cell culture (86)
Epithelial cell (29)
Liver (20)
Blood plasma (15)
Plant cell (14)
Brain (13)
Permanent cell line cell (13)
Testis (12)
Whole body (12)
Plasma Non-glyco (11)
Blood serum (11)
Early embryonic cell (10)
Heart (10)
Leaf (10)
Hepatocyte (8)
Lung (7)
Oocyte (6)
Cell suspension culture (6)
Root (6)
Colon (6)
Macrophage (5)
Bone marrow (4)
Stem cell (4)
HeLa cell (4)
Primary cell (4)
Blood cell (4)
Others (3)
Epididymal white adipose tissue (3)
Male Reproductive System (2)
Female Reproductive System (1)

Disease

Disease free (15)
Colon cancer (9)
Breast cancer (7)
Cervix carcinoma (5)
Alzheimer's disease (4)
Acute leukemia (4)
Hepatocellular carcinoma (3)
Severe acute respiratory syndrome (3)
Melanoma (3)
Liver cancer (3)
Primary immunodeficiency disease (2)
Prostate adenocarcinoma (2)
Cardiovascular system disease (2)
Alopecia (1)
Not Available (1)
Demyelinating disease (1)
Alzheimer's disease 18 (1)
Neuropathic pain (1)
Bladder neck obstruction (1)
Dermatofibrosarcoma protuberans (1)
Acute kidney failure (1)
Endometriosis of uterus (1)
Non-alcoholic steatohepatitis (1)
Primary ovarian insufficiency (1)
Mastitis (1)
Skin melanoma (1)
Kidney disease (1)
Chronic obstructive pulmonary disease (1)
Non-small cell lung carcinoma (1)
Plasmodium falciparum malaria (1)

Technology Type

Mass Spectrometry (371)
Shotgun proteomics (166)
Mass spectrometry (96)
Bottom-up proteomics (55)
Data-dependent acquisition (42)
Gel-based experiment (41)
Affinity purification coupled with mass spectrometry proteomics (28)
Data-independent acquisition (21)
Top-down proteomics (19)
Mass spectrometry assay (15)
Chemical cross-linking coupled with mass spectrometry proteomics (12)
SWATH MS (9)
Proteogenomics (5)
NMR spectroscopy (4)
Immunopeptidomics (4)
All-ion fragmentation (3)
Illumina HiSeq 2000, ILLUMINA (2)
Mass spectrometry imaging (2)
Affymetrix/Illumina (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Olink affinity proteomics (1)
Glycoproteomics (1)
MSE (1)
DiaPASEF (1)

Instrument Platform

LTQ Orbitrap Velos (18)
Q Exactive (9)
LTQ Orbitrap Elite (5)
SepSolve GCxGC-BenchTOF (4)
Q Exactive HF (4)
Orbitrap Fusion Lumos (4)
LTQ FT (3)
MS:1000031 (3)
LTQ Orbitrap XL (3)
Illumina NovaSeq 6000 (2)
Illumina HiSeq 2000 (2)
Agilent GC-qTOF (2)
Orbitrap Fusion ETD (2)
Element AVITI (1)
Ilumina HiScan H166 (1)
Illumina iScan (1)
Illumina Genome Analyzer IIx (1)
GenePix 4000B [Axon Instruments] (1)
Affymetrix Fluidics Station 400 (1)
NA (1)
Illumina HiSeq 1000 (1)
BGISEQ-500 (1)
HiSeq X Ten (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
LCQ Classic (1)
MicrOTOF-Q II (1)
MaXis (1)
Instrument (1)

Publication Date

2025 (113)
2022 (111)
2023 (102)
2024 (83)
2026 (70)
2021 (70)
2013 (68)
2015 (64)
2014 (53)
2012 (48)
2020 (44)
2019 (35)
2016 (32)
2018 (23)
2010 (22)
2011 (17)
2017 (16)
2009 (13)
2008 (9)
2007 (9)
2005 (7)
2006 (1)

UNIPROT ID/AC

9544.ENSMMUP00000006027 (1)
A0A1D5RJC7_MACMU (1)
F6Q7N0_MACMU (1)
F6XBV1_MACMU (1)
F7ABW1_MACMU (1)
F6U4H5_MACMU (1)
9544.ENSMMUP00000033609 (1)
A0A5F8A9W2_MACMU (1)
A0A5K1U1T6_MACMU (1)
F7AMB0_MACMU (1)
F7GYQ8_MACMU (1)
F6RX66_MACMU (1)
F7H6C5_MACMU (1)
STAR3_MACMU (1)
9544.ENSMMUP00000006070 (1)
A0A5F7ZIL1_MACMU (1)
A0A5F8A4M4_MACMU (1)
A0A5F7ZFD6_MACMU (1)
CD151_MACMU (1)
9544.ENSMMUP00000040792 (1)
A0A1D5QAX2_MACMU (1)
9544.ENSMMUP00000038489 (1)
H9FP82_MACMU (1)
F7E0U0_MACMU (1)
F7C5I9_MACMU (1)
B9X0T5_MACMU (1)
F7FZU7_MACMU (1)
9544.ENSMMUP00000039792 (1)
A0A5F7ZYA2_MACMU (1)
F7GWE0_MACMU (1)

ENSEMBL ID

ENSG00000170477 (17)
ENSG00000147251 (9)
ENSG00000247315 (6)
ENSG00000229353 (3)
ENSG00000214897 (2)
ENSG00000204131 (2)

CHEBI ID

CHEBI:17368 (43)
CHEBI:16704 (40)
CHEBI:17596 (39)
CHEBI:16335 (38)
CHEBI:30769 (38)
CHEBI:17568 (37)
CHEBI:17154 (36)
CHEBI:16708 (35)
CHEBI:16750 (35)
CHEBI:7916 (35)
CHEBI:17351 (35)
CHEBI:15741 (34)
CHEBI:30915 (34)
CHEBI:16737 (34)
CHEBI:16196 (33)
CHEBI:17509 (33)
CHEBI:17750 (33)
CHEBI:15756 (33)
CHEBI:15891 (32)
CHEBI:32816 (32)
CHEBI:15354 (32)
CHEBI:17895 (32)
CHEBI:16040 (31)
CHEBI:17015 (31)
CHEBI:16919 (31)
CHEBI:16359 (30)
CHEBI:17821 (29)
CHEBI:16235 (29)
CHEBI:18183 (29)
CHEBI:16027 (29)

Metabolite Name

Hypoxanthine (31)
Adenosine (29)
Guanosine (26)
Uracil (25)
Inosine (25)
Creatinine (24)
Adenine (23)
Taurine (22)
Xanthine (21)
Uridine (21)
L-Arginine (20)
Choline (20)
Uric acid (20)
L-Tyrosine (20)
Betaine (19)
Cholic acid (19)
Thymidine (19)
L-Proline (18)
Guanine (18)
Riboflavin (18)
Indole (17)
Cytidine (17)
Creatine (17)
L-Carnitine (17)
L-Leucine (17)
L-Histidine (16)
Sphinganine (16)
Palmitic acid (16)
Oleic acid (16)
Linoleic acid (16)

First Public Date

2019 (1)
2018 (1)
2014 (1)

Modelling Approach

Constraint-based model (1)

Lab affiliation

Beijing proteome research center (4)
West China Second University Hospital, Sichuan University (4)
BGI Research (3)
The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China (3)
Shanghai Institute of Materia Medica, Chinese Academy of Sciences (2)
Department of Laboratory Medicine, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China. (2)
Human Phenome Institute,Zhangjiang FudanInternational Innovation Center, Fudan UniversityShanghai, 201203, China. (2)
Institute of Crop Germplasm Resources, Shandong Academy of Agricultural Sciences, Ji’nan, 250100, Shandong, China (2)
College of Pharmacy, Jinan University, Guangzhou, China (2)
Division of Life Science, The Hong Kong University of Science and Technology, Hong Kong SAR, China (2)
Key Laboratory of Modern Toxicology of Shenzhen, Shenzhen Center for Disease Control and Prevention, No. 8, Longyuan Road, Nanshan District, Shenzhen, China 518055. (2)
Beijing Key Laboratory of Protein Posttranslational Modifications and Cell Function, Department of Biochemistry and Biophysics, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, 100191, China. (2)
Key Laboratory for Experimental Teratology of the Ministry of Education, Advanced Medical Research Institute, Qilu Hospital, Cheeloo College of Medicine, Shandong University (2)
State Key Laboratory for Innovation and Transformation of Luobing Theory; Key Laboratory of Cardiovascular Remodeling and Function Research, Chinese Ministry of Education, Chinese National Health Commission and Chinese Academy of Medical Sciences; Department of Cardiology, Qilu Hospital of Shandong University, Jinan, China (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Associate Editor, ACS Chemical Biology (2)
yangjinguang@caas.cn (2)
The First Affiliated Hospital with Nanjing Medical University (2)
Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University (2)
CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China (2)
New Cornerstone Science Laboratory, State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University, Chengdu, China (2)
Center for Stem Cell Biology and Tissue Engineering, Key Laboratory for Stem Cells and Tissue Engineering, Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, China. (2)
The First Affiliated Hospital, School of Medicine, Zhejiang University (2)
College of Horticulture, Hunan Agricultural University (2)
Center for Translational Medicine, The Affiliated Zhangjiagang Hospital of Soochow University, Suzhou Medical College of Soochow University (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Executive Editor, ACS Chemical Biology (2)
National Center for Protein Science Beijing (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
State Key Laboratory of Medical Molecular Biology, Department of Biochemistry and Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing 100005, China (2)
Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
State Key Laboratory of Medical Molecular Biology, Department of Biochemistry and Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing 100005, China. (2)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Modification

4x(2)H labeled dimethylated L-lysine (2)
N6 (1)

Study type

Transcription profiling by array (157)
RNA-seq of coding RNA (69)
ChIP-chip by tiling array (11)
Comparative genomic hybridization by array (11)
Other (11)
RNA-seq of non coding RNA (11)
ChIP-seq (7)
Methylation profiling by array (6)
Methylation profiling by high throughput sequencing (5)
Unknown experiment type (3)
MicroRNA profiling by array (3)
Genotyping by array (2)
RNA-seq of total RNA (2)
Transcription profiling by SAGE (1)
Human - One-color microarray (1)
Transcription profiling by RT-PCR (1)
CUT&RUN (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (4639)
2022 (3968)
2023 (3556)
2024 (3509)
2021 (2929)
2020 (2229)
2019 (1537)
2018 (1245)
2017 (982)
2016 (810)
2015 (642)
2026 (627)
2014 (470)
2013 (347)
2012 (253)
2011 (133)
2010 (89)
2009 (68)
2008 (42)
2007 (25)
2005 (18)
2006 (17)
2004 (8)
2003 (3)
2002 (3)
2001 (2)
2000 (1)
1999 (1)

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L-fucose and fucoidan alleviate high-salt diet-promoted acute inflammation

Excessive salt intake is a widespread health issue observed in almost every country around the world. A high salt diet (HSD) has a strong correlation with numerous diseases, including hypertension, chronic kidney disease and autoimmune disorders. However, the mechanisms underlying HSD-promotion o...

2024-02-21 | MTBLS9134 | MetaboLights

L-leucine increases the sensitivity of drug-resistant Salmonella to sarafloxacin by stimulating central carbon metabolism and increasing intracellular reactive oxygen species level (LC-MS positive mode)

The overuse of antibiotics has made public health and safety face a serious crisis. It is urgent to develop new clinical treatment methods to combat drug-resistant bacteria to alleviate the health crisis. The efficiency of antibiotics is closely related to the metabolic state of bacteria. However...

2023-05-02 | MTBLS7711 | MetaboLights

2023-05-02 | MTBLS7713 | MetaboLights

Methionine Intervention Induces PD-L1 Expression to Enhance the Immune Checkpoint Therapy Response in MTAP-deleted Osteosarcoma

Osteosarcoma (OS), a malignant bone tumor with limited treatment options, exhibits low sensitivity to immune checkpoint therapy (ICT). Through genomics and transcriptomics analyses, we have identified a subgroup of OS with methylthioadenosine phosphorylase (MTAP) deletion, which contributes to ICT r...

2026-06-09 | MTBLS11985 | MetaboLights

Expression data from mouse skeletal muscle

We generated skeletal muscle-specific knockout mice lacking the transcription factor Yin Yang 1 (YY1) and analyzed expression patterns in the skeletal muscle these mice. We used microarrays to detail the global programme of gene expression regulated by YY1. Wild type or knockout mice at 6 months wer...

ORGANISM(S): Mus musculus

2012-06-29 | E-GEOD-39009 | biostudies-arrayexpress

Liu-pao Tea as a Source of Botanical Oviposition Attractants for <i>Aedes</i> Mosquitoes.

Not available

S-EPMC12564205 | biostudies-literature

Efficacy of Liu-zi-jue in Patients with 2019 Novel Coronavirus Pneumonia (COVID-19): structured summary of a study protocol for a randomized controlled trial.

Not available

S-EPMC7245505 | biostudies-literature

Acupressure therapy and Liu Zi Jue Qigong for pulmonary function and quality of life in patients with severe novel coronavirus pneumonia (COVID-19): a study protocol for a randomized controlled trial.

Not available

S-EPMC7450683 | biostudies-literature

Integrated Strategy of Network Pharmacological Prediction and Experimental Validation Elucidate Possible Mechanism of Bu-Yang Herbs in Treating Postmenopausal Osteoporosis via ESR1.