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ProteomicsQuantifying Cell Heterogeneity and Subpopulations Using Single Cell Metabolomics
We combined the Single-probe single cell MS(SCMS) experimental technique with a bioinformatics software package, SinCHet-MS (Single Cell Heterogeneity for Mass Spectrometry), to characterize changes of tumor heterogeneity, quantify cell subpopulations, and prioritize the metabolite biomarkers of eac...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-06-15 | MSV000092178 | MassIVE
MetabolomicsGNPS - Quantifying Cell Heterogeneity and Subpopulations Using Single Cell Metabolomics
We combined the Single-probe single cell MS(SCMS) experimental technique with a bioinformatics software package, SinCHet-MS (Single Cell Heterogeneity for Mass Spectrometry), to characterize changes of tumor heterogeneity, quantify cell subpopulations, and prioritize the metabolite biomarkers of eac...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-06-15 | MSV000092178 | GNPS
OtherTrypanosoma cruzi infection in HeLa cells
Single-probe single cell mass spectrometry (SCMS) analysis contains 3 sets of experiments: 1. SCMS analysis of 4 groups of cells: infected, bystanders, stained and control cells 2. SCMS analysis of 3 groups of cells (2 replicates): infected, correctly classified bystander, misclassified bystander ce...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Trypanosoma Cruzi (ncbitaxon:5693) 
2022-05-20 | MSV000089503 | MassIVE
MetabolomicsGNPS Trypanosoma cruzi infection in HeLa cells
Single-probe single cell mass spectrometry (SCMS) analysis contains 3 sets of experiments: 1. SCMS analysis of 4 groups of cells: infected, bystanders, stained and control cells 2. SCMS analysis of 3 groups of cells (2 replicates): infected, correctly classified bystander, misclassified bystander ce...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Trypanosoma Cruzi (ncbitaxon:5693) 
2022-05-20 | MSV000089503 | GNPS
ProteomicsComparative seed proteome profile reveals no alternation of major allergens of high yielding mung bean cultivars
Mung bean contains up to 25% of the protein, is one of the great sources of plant-based protein. Since many allergens also function as defense-related proteins, it is important to determine their abundance level in the high-yielding disease-resistant cultivars. In this study, for the first time, we ...
ORGANISM(S): Vigna Radiata (ncbitaxon:157791) 
2024-01-19 | MSV000093895 | MassIVE
ProteomicsPreconception COVID-19 Vaccination Reprograms Fetal Metabolism to Accelerate Intrauterine Recovery and Suppress Persistent Metabolic Memory
The LC-MS/MS raw data from negative mode of umbilical cord blood from pregnant women
ORGANISM(S): Homo Sapiens 
PXD078591 |
Genomicsena-DATASET-BGI-31-12-2014-03:23:33:590-567 - samples
Gastric Cancer (GC) is a highly heterogeneous disease. To identify potential clinically actionable therapeutic targets that may inform individualized treatment strategies, we performed whole-exome sequencing on 78 GCs of differing histologies and anatomic locations, as well as whole-genome sequencin...
EGAD00001001118 | EGA
GenomicsWGS and WES of 78 pairs Chinese gastric cancer
Gastric Cancer (GC) is a highly heterogeneous disease. To identify potential clinically actionable therapeutic targets that may inform individualized treatment strategies, we performed whole-exome sequencing on 78 GCs of differing histologies and anatomic locations, as well as whole-genome sequencin...
EGAS00001001056 | EGA
ProteomicsThe proteome data of human mesenchymal stem cell derived from healthy donors
The protein samples stored at -80 °C were thawed and treated with lysis buffer (8M urea, 1% protease inhibitor, 50mM NH4HCO3) for 5 minutes in room temperature. After ultrasonic cracking on ice and centrifugation at 14000g for 10 min at 20 °C, the amount of total protein of each MSC sample was detec...
ORGANISM(S): Homo Sapiens 
2023-06-12 | PXD033812 |
ProteomicsThe proteome data of extracellular vesicles derived from human umbilical cord and bone marrow mesenchymal stem cells
The protein samples stored at -80 °C were thawed and treated with lysis buffer (8M urea, 1% protease inhibitor, 50mM NH4HCO3) for 5 minutes in room temperature. After ultrasonic cracking on ice and centrifugation at 14000g for 10 min at 20 °C, the amount of total protein of each MSC sample was detec...
ORGANISM(S): Homo Sapiens 
PXD042977 |
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