Yao Chen C - OmicsDI

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Unknown (3806)
Proteomics (136)
Transcriptomics (35)
Metabolomics (13)
Genomics (6)
Other (1)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (64)
Andropogon gerardi (64)
Bacteria (64)
Bartonella quintana JK 31 (64)
Canis lupus familiaris (64)
Cnidaria (64)
Ectopseudomonas oleovorans CECT 5344 (64)
Ensifer adhaerens (64)
Globicatella sanguinis (64)
Halictus scabiosae (64)
Human immunodeficiency virus 1 (64)
Mesocricetus auratus (64)
Homo sapiens (55)
Mus musculus (26)
Rattus norvegicus (3)
Rattus rattus (3)
Mus (2)
Tardigrada (2)
Camellia sinensis (1)
Oryzias latipes (1)
Brassica napus (1)
Zea mays (1)
Plasmodium falciparum (1)
Escherichia coli BL21(DE3) (1)
Gallus gallus (1)
Hordeum vulgare (1)
Ovis aries (1)
Saccharomyces cerevisiae (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Triticum aestivum (1)

Repository

pride (64)
iProX (50)
biostudies-arrayexpress (39)
PeptideAtlas (13)
MetaboLights (12)
MassIVE (9)
EGA (1)
GNPS (1)
GPMDB (1)
ENA (1)

Tissue

Cell culture (21)
Plasma Non-glyco (11)
Epithelial cell (8)
Leaf (4)
Abdominal adipose tissue (3)
Testis (3)
Whole body (3)
Male Reproductive System (2)
Blood (2)
Blood plasma (2)
Macrophage (2)
Plant cell (2)
Adductor (1)
Adipocyte (1)
B cell (1)
Blood serum (1)
Brain (1)
Colon (1)
Colorectal cancer cell (1)
Early embryonic cell (1)
Fat cell (1)
Flower (1)
HEK-293T cell (1)
Hepatocyte (1)
Intervertebral disc (1)
Multiple myeloma cell line (1)
Pancreas (1)
Pancreatic cancer cell (1)
Peritoneal macrophage (1)
Permanent cell line cell (1)

Disease

Disease free (4)
Not Available (1)
Abdominal aortic aneurysm (1)
Acute leukemia (1)
Cardiovascular system disease (1)
Colon cancer (1)
Oligospermia (1)
Pancreatic ductal adenocarcinoma (1)
Septicemia (1)
Thyroid cancer (1)

Technology Type

Mass Spectrometry (64)
Shotgun proteomics (25)
Bottom-up proteomics (11)
Mass spectrometry (10)
Affinity purification coupled with mass spectrometry proteomics (7)
Data-dependent acquisition (7)
Gel-based experiment (7)
Data-independent acquisition (5)
Top-down proteomics (3)
NMR spectroscopy (1)
Mass spectrometry assay (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Mass spectrometry imaging (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

LTQ Orbitrap Velos (15)
Liquid Chromatography MS - positive - reverse phase (7)
Liquid Chromatography MS - negative - reverse phase (7)
Q Exactive HF (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Illumina NovaSeq 6000 (2)
LTQ Orbitrap (2)
Illumina HiSeq 1000 (1)
LTQ FT (1)
MaXis (1)
Instrument (1)
Q Exactive HF-X (1)
Q Exactive Plus (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)

Publication Date

2025 (28)
2023 (23)
2022 (23)
2015 (19)
2026 (16)
2021 (15)
2024 (15)
2020 (9)
2014 (9)
2013 (7)
2012 (4)
2019 (4)
2016 (3)
2011 (3)
2009 (3)
2018 (3)
2010 (2)
2008 (1)

UNIPROT ID/AC

A0A024RC46 (13)
A5A3E0 (13)
A6NNZ2 (13)
B3KML9 (13)
B4DHB3 (13)
B4DL86 (13)
B4DRV9 (13)
B4DY08 (13)
B4E3A4 (13)
C9JM50 (13)
E7EX29 (13)
G8JLB6 (13)
H0YM50 (13)
H7BZ94 (13)
I3L4N8 (13)
J3KPS3 (13)
J3QRK5 (13)
M0QZ52 (13)
O00299 (13)
O14556 (13)
O14818 (13)
O60812 (13)
O75369 (13)
O75369-8 (13)
O75694 (13)
O76013 (13)
O76015 (13)
O95678 (13)
P00338 (13)
P00338-3 (13)

ENSEMBL ID

ENSG00000170477 (13)
ENSG00000147251 (5)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:16919 (5)
CHEBI:16335 (4)
CHEBI:17568 (4)
CHEBI:7916 (4)
CHEBI:18019 (4)
CHEBI:18050 (4)
CHEBI:17895 (4)
CHEBI:18089 (4)
CHEBI:16450 (3)
CHEBI:73074 (3)
CHEBI:36259 (3)
CHEBI:16040 (3)
CHEBI:18295 (3)
CHEBI:16750 (3)
CHEBI:16977 (3)
CHEBI:28842 (3)
CHEBI:15741 (3)
CHEBI:64294 (3)
CHEBI:17015 (3)
CHEBI:17821 (3)
CHEBI:15727 (3)
CHEBI:17196 (3)
CHEBI:28661 (3)
CHEBI:17203 (3)
CHEBI:15891 (3)
CHEBI:15843 (3)
CHEBI:43355 (3)
CHEBI:30915 (3)
CHEBI:16347 (3)
CHEBI:16643 (3)

Metabolite Name

Riboflavin (4)
Creatine (4)
Hippuric acid (4)
Hypoxanthine (4)
N-Acetyl-L-methionine (3)
Trigonelline (3)
Uracil (3)
Thymine (3)
L-Dopa (3)
L-Proline (3)
7-Ketocholesterol (3)
Taurine (3)
Xanthosine (3)
Citric acid (3)
Pyrrolidine (3)
Adenosine (3)
Salicylic acid (3)
L-Tryptophan (3)
Guanosine (3)
Uridine (3)
L-Valine (3)
L-Methionine (3)
Bilirubin (3)
4',5,8-Trihydroxyflavanone (2)
N-Phenylacetylglycine (2)
Myricetin (2)
Quercetin (2)
Phlorin (2)
27-Norcholestanehexol (2)
Cotinine glucuronide (2)

First Public Date

2022 (1)

Study type

Transcription profiling by array (21)
RNA-seq of coding RNA (8)
Genotyping by array (3)
ChIP-seq (2)
DNA-seq (2)
RNA-seq of total RNA (2)
RNA-seq of non coding RNA (1)

Release Date

2025 (629)
2022 (547)
2023 (488)
2024 (482)
2021 (398)
2020 (301)
2019 (187)
2017 (169)
2018 (164)
2016 (101)
2015 (97)
2026 (74)
2014 (63)
2013 (41)
2012 (33)
2008 (18)
2009 (16)
2011 (14)
2010 (12)
2007 (6)
2005 (2)
2006 (1)
2004 (1)
2003 (1)

Lab affiliation

Guangzhou Medical University (4)
XiangYa hospital of Central south university (3)
1 Interdisciplinary Research Center on Biology and Chemistry, State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China 2 Shanghai Academy of Natural Sciences (SANS), Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China (2)
Institute of Medical Biology, Chinese Academy of Medical Science and Peking Union Medical School, Kunming, China. (2)
Tianjin Medical University Cancer Institute and Hospital (2)
1 Interdisciplinary Research Center on Biology and Chemistry, State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China 2 Shanghai Academy of Natural Sciences (SANS), Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China (lab head) (1)
Beijing University of Chinese Medicine, School of Traditional Chinese Medicine, Attending Physician, Assistant Researcher (1)
Bone Marrow Transplantation Center, Department of Hematology, The First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, China (1)
CAS Center for Excellence in Molecular Plant Science, Chinese Academic on Science (1)
Center of Reproductive Medicine, Nanjing Jinling Hospital, Clinical School of Medical College, Nanjing University, China. (1)
China-Japan Union Hospital of Jilin University (1)
China-UK-NYNU-RRES Joint Laboratory of Insect Biology, Nanyang Normal University (NYNU), Nanyang 473061, Henan, People’s Republic of China (1)
College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, China (1)
Department of Anesthesiology, Nanjing Drum Tower Hospital,Affiliated Hospital of Medical School,Nanjing University (1)
Department of Biochemistry and Molecular Medicine, The George Washington University School of Medicine and Health Science, 2300 Eye Street, N.W., Washington, DC 20037, USA (1)
Department of Biochemistry, University of Oxford, Oxford, OX1 3QU, UK (1)
Department of Dermatology, Xinhua Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China (1)
Department of Immunology, College of Basic Medical Science, China Medical University, Shenyang, Liaoning 110122, China (1)
Department of Molecular and Cellular Oncology, MD Anderson Cancer Center, Houston, TX USA (1)
Department of Ophthalmology, Shanghai General Hospital; Shanghai Key Laboratory of Ocular Fundus Disease; Shanghai Engineering Center for Visual Science and Photomedicine, No. 100 Haining Road, Shanghai 200080, China. (1)
Department of Plant Pathology, University of Georgia, Athens, Georgia, USA (1)
Fudan University (1)
Institute of Bioengineering, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, Zhejiang 310027, China (1)
Interdisciplinary Research Center on Biology and Chemistry, State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China (1)
Jiangsu Academy of Agricultural Sciences (1)
Jiangxi Province Key Laboratory of Laboratory Medicine, Department of Clinical Laboratory, The Second Affiliated Hospital of Nanchang University, Nanchang, China. (1)
Kunming Institute of Zoology, Chinese Academy of Sciences (1)
MC (1)
Medical Research Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, China (1)
Medicine and Pharmacy Research Center, Binzhou Medical University (1)

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Apolipoprotein C3 (-455T>C) polymorphism confers susceptibility to nonalcoholic fatty liver disease in the Southern Han Chinese population.

Not available

S-EPMC4194587 | biostudies-literature

Comparative analyses of fecal microbiota in Chinese isolated Yao population, minority Zhuang and rural Han by 16sRNA sequencing.

Not available

S-EPMC5773753 | biostudies-literature

An Integrated Pharmacology-Based Analysis for Antidepressant Mechanism of Chinese Herbal Formula Xiao-Yao-San.

Not available

S-EPMC7094752 | biostudies-literature

From classical Chinese formula to modern mechanism: how Xiao-Yao-San modulates key signaling pathways in depression.

Not available

S-EPMC12805791 | biostudies-literature

Dynamically reorganized chromatin is the key for the reprogramming of somatic cells to pluripotent cells

We investigated genome-wide nucleosome coverage and histone methylation occupancies in somatic MEFs, intermediate pre-iPSCs and fully reprogrammed iPSCs. We found that nucleosome occupancies increased in promoter regions and decreased in intergenic regions in pre-iPSCs and then recover to an interme...

ORGANISM(S): Mus musculus

2015-12-13 | E-GEOD-60627 | biostudies-arrayexpress

Synergistic impact of Gui Zhi Shao Yao Zhi Mu Decoction and leflunomide on gut microbiota in rheumatoid arthritis: insights from 16S rDNA sequencing.

Not available

S-EPMC10918140 | biostudies-literature

Understanding the relationship between circulating lipids and risk of chronic kidney disease: a prospective cohort study and large-scale genetic analyses.

Not available

S-EPMC10537816 | biostudies-literature

Temporal relationship between sleep duration and obesity among Chinese Han people and ethnic minorities.

Not available

S-EPMC10015728 | biostudies-literature

Genetic variation and forensic efficiency of 30 indels for three ethnic groups in Guangxi: relationships with other populations.

Not available

S-EPMC6501771 | biostudies-literature

Symbiont proteome data of whiteflies

To examined the effect of the antibiotic treatment on protein expression of symbionts in the whitefly. Proteome analysis showed that 23 Hamiltonella proteins were down-regulated in Hamiltonella-cured (–HBt) compared to Hamiltonella-infected (+HBt) whiteflies (Dataset S1A,B), this data including all ...

ORGANISM(S): Rickettsia sp. MEAM1 (Bemisia tabaci)

2023-02-14 | PXD038323 | Pride

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3997 Results

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