Yao R R - OmicsDI

Show results for

Unknown (7598)
Transcriptomics (164)
Proteomics (156)
Metabolomics (40)
Genomics (31)
Multiomics (3)
Models (1)
Genomic (1)
Other (1)

Organisms

Homo sapiens (171)
Mus musculus (83)
Rattus norvegicus (11)
Arabidopsis thaliana (10)
Zea mays (4)
Bos taurus (4)
Rattus rattus (4)
Gallus gallus (3)
Citrus reticulata (2)
Oncorhynchus mykiss (2)
Escherichia coli (2)
Tardigrada (2)
Mammalia (1)
Brassica rapa subsp. oleifera (1)
Dunaliella tertiolecta (1)
Ostrinia nubilalis (1)
Mustela putorius furo (1)
Streptococcus sp. 'group A' (1)
Escherichia coli str. K-12 substr. W3110 (1)
Arachis hypogaea (1)
Brassica rapa subsp. pekinensis (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)
Prunus persica (1)
Escherichia coli BW25113 (1)
Medicago truncatula (1)
Mycobacterium tuberculosis (1)
Triticum aestivum (1)
Saccharomyces cerevisiae (1)
Drosophila melanogaster (1)
Danio rerio (1)

Organisms

Mus musculus (2)

Repository

biostudies-arrayexpress (177)
pride (80)
iProX (58)
MetaboLights (39)
EGA (14)
MassIVE (11)
jPOST (5)
LINCS (3)
ENA (3)
PeptideAtlas (2)
BioModels (1)
dbGaP (1)
GNPS (1)
GPMDB (1)
NODE (1)

Tissue

Cell culture (21)
Epithelial cell (5)
Macrophage (4)
Abdominal adipose tissue (3)
Blood (3)
Blood cell (3)
Heart (3)
Hepatocyte (3)
Lung (3)
Root (3)
Male Reproductive System (2)
Blood plasma (2)
Brain (2)
Kidney (2)
Liver (2)
Pancreas (2)
Whole body (2)
Hematocyte (1)
Rectum (1)
Adductor (1)
Adipose tissue (1)
Amniotic fluid (1)
Blood serum (1)
Breast (1)
Cardiomyocyte cell line (1)
Cerebrospinal fluid (1)
Colon epithelial cell (1)
HEK-293T cell (1)
HeLa cell (1)
JURKAT cell (1)

Disease

Disease free (5)
COVID-19 (3)
Lung adenocarcinoma (2)
Malaria (2)
High bone mineral density (1)
Colorectal cancer (1)
SS2-infected (1)
Not Available (1)
Acute myocardial infarction (1)
Antenatal onset (1)
Breast cancer (1)
Cardiovascular system disease (1)
Cervix carcinoma (1)
Colon cancer (1)
Gastric ulcer (1)
Hydronephrosis (1)
Malignant neoplasm of ovary (1)
Non-small cell lung carcinoma (1)
Oligospermia (1)
Ovarian serous carcinoma (1)
Parkinson's disease (1)
Polycystic ovary syndrome (1)
Prion disease (1)
Retinopathy of prematurity (1)
Schmid metaphyseal chondrodysplasia (1)
Septicemia (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (80)
Shotgun proteomics (41)
Mass spectrometry (23)
Data-dependent acquisition (12)
Bottom-up proteomics (11)
Mass spectrometry assay (10)
NMR spectroscopy (7)
Affinity purification coupled with mass spectrometry proteomics (7)
Gel-based experiment (4)
SWATH MS (4)
Chemiluminescence (3)
ELISA (3)
Data-independent acquisition (2)
Mass spectrometry imaging (2)
Top-down proteomics (2)
Illumina HiSeq 2000 (1)
All-ion fragmentation (1)
DiaPASEF (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (12)
Liquid Chromatography MS - positive - reverse phase (11)
Liquid Chromatography MS - negative - hilic (9)
Liquid Chromatography MS - positive - hilic (9)
Liquid Chromatography MS - negative - reverse-phase (5)
Liquid Chromatography MS - positive - reverse-phase (5)
Nuclear Magnetic Resonance (NMR) - (5)
Illumina HiSeq 2500 (2)
LTQ Orbitrap (2)
Q Exactive HF-X (2)
Bruker (2)
Liquid Chromatography MS - positive - HILIC (2)
Illumina Genome Analyzer IIx (1)
Illumina HiSeq 1000 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
LTQ FT (1)
MaXis (1)
Instrument (1)
LTQ Orbitrap Velos ETD (1)
Orbitrap Exploris 480 (1)
Q Exactive (1)
Q Exactive HF (1)
Q Exactive Plus (1)
TimsTOF Pro 2 (1)
Exactive (Thermo Scientific) (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (NEG)) (1)
Liquid Chromatography MS - Positive (LC-MS (POS)) (1)
Liquid Chromatography MS - alternating - HILIC (1)

Publication Date

2022 (36)
2015 (32)
2024 (31)
2025 (31)
2021 (28)
2012 (24)
2026 (22)
2016 (22)
2013 (22)
2023 (22)
2014 (20)
2010 (18)
2011 (16)
2008 (12)
2009 (9)
2018 (8)
2020 (7)
2017 (6)
2019 (5)
2007 (4)
2006 (1)
2005 (1)

UNIPROT ID/AC

A0A024R563 (2)
A0A024R8H9 (2)
A0A024RAN2 (2)
A0A024RC46 (2)
A0A075B6P5 (2)
A0A087WT59 (2)
A0A087WTX5 (2)
A0A087WVW2 (2)
A0A087WVZ5 (2)
A0A087WWA5 (2)
A0A087WXI0 (2)
A0A087WYL9 (2)
A0A087X130 (2)
A0A087X1S3 (2)
A0A087X1V9 (2)
A0A087X232 (2)
A0A0A0MS07 (2)
A0A0A0MS51 (2)
A0A0A0MSA7 (2)
A0A0B4J1V0 (2)
A0A0C4DG89 (2)
A0AV96 (2)
A0AVF1 (2)
A0AVT1 (2)
A0FGR8 (2)
O96020 (1)
P01106 (1)
P06400 (1)
P24864 (1)
Q01094 (1)

ENSEMBL ID

ENSG00000170477 (2)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000147251 (1)
ENSG00000204131 (1)

CHEBI ID

CHEBI:16919 (13)
CHEBI:16704 (11)
CHEBI:7916 (11)
CHEBI:17368 (10)
CHEBI:17568 (10)
CHEBI:17821 (10)
CHEBI:30915 (10)
CHEBI:15891 (9)
CHEBI:16449 (9)
CHEBI:16750 (9)
CHEBI:28044 (9)
CHEBI:15428 (8)
CHEBI:15741 (8)
CHEBI:16335 (8)
CHEBI:17596 (8)
CHEBI:27897 (8)
CHEBI:78320 (8)
CHEBI:15756 (7)
CHEBI:16040 (7)
CHEBI:16737 (7)
CHEBI:16811 (7)
CHEBI:17750 (7)
CHEBI:18012 (7)
CHEBI:22660 (7)
CHEBI:27266 (7)
CHEBI:15354 (6)
CHEBI:15727 (6)
CHEBI:16015 (6)
CHEBI:16196 (6)
CHEBI:16359 (6)

Metabolite Name

Creatine (11)
Hypoxanthine (10)
Uridine (10)
Guanosine (9)
L-Tryptophan (9)
Azelaic acid (7)
Creatinine (7)
Inosine (7)
L-Proline (7)
Taurine (7)
Thymine (7)
Uracil (7)
Adenine (6)
Adenosine (6)
Betaine (6)
Bilirubin (6)
Corchorifatty acid F (6)
Hippuric acid (6)
Histamine (6)
L-Arginine (6)
L-Carnitine (6)
Riboflavin (6)
Salicylic acid (6)
Xanthine (6)
Xanthosine (6)
2-Isopropylmalic acid (5)
6-Oxopiperidine-2-carboxylic acid (5)
7-Ketocholesterol (5)
Cholic acid (5)
Choline (5)

First Public Date

2026 (1)
2020 (1)
2014 (1)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

Institute for Cardiovascular Regeneration, Centre for Molecular Medicine, Goethe University Frankfurt am Main, Germany (3)
1 Interdisciplinary Research Center on Biology and Chemistry, State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China 2 Shanghai Academy of Natural Sciences (SANS), Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China (2)
Division of Nephrology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology (2)
School of Life Sciences, Xiamen University (2)
1 Interdisciplinary Research Center on Biology and Chemistry, State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China 2 Shanghai Academy of Natural Sciences (SANS), Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China (lab head) (1)
ADLQ (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University Munich (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Beijing University of Chemical Technology (1)
Capital Institute of Pediatrics (1)
Center for Medical Biotechnology, VIB, 9000 Ghent, Belgium Department of Biochemistry, Ghent University, 9000 Ghent, Belgium (1)
Center of Reproductive Medicine, Nanjing Jinling Hospital, Clinical School of Medical College, Nanjing University, China. (1)
Cheeloo College of Medicine, Shandong University, Jinan 250002, PR.China. Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei 230001, China. (1)
Cheeloo College of Medicine, Shandong University, Jinan 250002, PR.China. Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei 230001, China. (1)
Chengdu university of traditional chinese medicine (1)
China-UK-NYNU-RRES Joint Laboratory of Insect Biology, Nanyang Normal University (NYNU), Nanyang 473061, Henan, People’s Republic of China (1)
Chinese Academy of Medical Science (CAMS) Oxford Institute (COI), University of Oxford; Oxford, U.K.; 3MRC Human Immunology Unit, MRC Weatherall Institute of Molecular Medicine, Radcliffe Department of Medicine, University of Oxford; Oxford, U.K. (1)
College of Life Sciences, Fujian Agriculture and Forestry University (1)
Dalian Institute of Chemical Physics, Chinese Academy of Sciences (1)
Department of Basic Medical Sciences, University of Arizona College of Medicine, Phoenix, AZ 85004, USA (1)
Department of Dermatology, Xinhua Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China (1)
Department of Endocrinology, Tongji Hospital Affiliated to Tongji University, School of Medicine, Tongji University, 1239 Siping Road, Shanghai 200092, China. (1)
Department of Gynecologic Oncology and Reproductive Medicine, The University of Texas MD Anderson Cancer Center, Houston, Texas (1)
Department of Immunology, Tianjin Medical University, Tianjin, China (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota 55905, United States (1)
Department of Life Sciences, Pohang University of Science and Technology, Pohang 790-784, Republic of Korea (1)
Department of Medicine II, Hematology/Oncology, Goethe University, Germany German Cancer Research Center and German Cancer Consortium, Germany (1)
Department of Molecular Biology, Princeton University, US (1)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research (CNCR), Amsterdam Neuroscience, VU University Amsterdam, The Netherlands (1)
Department of Obstetrics and Gynecology, Inova Fairfax Medical Campus, Inova Health System (1)
Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China (1)

IsPrivate

False (1)

Study type

Transcription profiling by array (117)
RNA-seq of coding RNA (24)
ChIP-seq (9)
Methylation profiling by array (4)
Methylation profiling by high throughput sequencing (4)
Unknown experiment type (3)
Comparative genomic hybridization by array (3)
Other (3)
RNA-seq of non coding RNA (3)
Transcription profiling by SAGE (2)
Genotyping by array (2)
RIP-seq (1)
MicroRNA profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (1253)
2022 (1055)
2024 (949)
2023 (932)
2021 (746)
2020 (586)
2019 (409)
2017 (342)
2018 (329)
2016 (266)
2015 (209)
2014 (158)
2026 (156)
2013 (90)
2012 (68)
2011 (52)
2010 (48)
2009 (40)
2008 (40)
2007 (22)
2006 (8)
2005 (4)
2004 (4)
2003 (3)
2000 (3)
2002 (2)
2001 (1)

Previous page
1 / 800
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 800
Next page

Sort by:

Relevance

Page size

R-loops Function as a Balance during Somatic Cell Reprogramming

PRJNA517073 | ENA

Yao2008_Rb_E2F_Switch

This is the model described in the article: A bistable Rb-E2F switch underlies the restriction point Guang Yao, Tae Jun Lee, Seiichi Mori, Joseph R. Nevins, Lingchong You, Nat Cell Biol 2008 10:476-482; PMID: 18364697 ; D...

2024-09-02 | BIOMD0000000318 | BioModels

R-loops coordinate with SOX2 in regulating reprogramming to pluripotency.

Not available

S-EPMC7360481 | biostudies-literature

RNA-seq of Medicago truncatula A17 and the ethylene insensitive sickle mutant interacting with the fungal root pathogen, Rhizoctonia solani AG8

This study compares the response of wild type (A17) and ethylene insensitive mutant (sickle) lines of the model legume Medicago truncatula to infection by the root-infecting necrotrophic fungal pathogen, Rhizoctonia solani AG8 (WAC10335). Two time points were taken, 2 and 7 days after inoculation al...

ORGANISM(S): Medicago truncatula

2017-06-06 | E-MTAB-5473 | biostudies-arrayexpress

R-carvedilol, a potential new therapy for Alzheimer's disease.

Not available

S-EPMC9756136 | biostudies-literature

(R)-1,1'-Binaphthalene-2,2'-diyl dicinnamate.

Not available

S-EPMC2961303 | biostudies-literature

Synergistic Therapeutic Effects of D-Mannitol-Cerium-Quercetin (Rutin) Coordination Polymer Nanoparticles on Acute Lung Injury

In our latest study, we pioneered the use of D-Mannitol-Cerium-Quercetin/Rutin coordination polymer nanoparticles (MCQ/R NPs) as a potential remedy for ALI. our in vivo studies with LPS-induced ALI mice showed significant mitigation of lung tissue inflammation. This groundbreaking research presents ...

ORGANISM(S): Mus Musculus

2024-04-10 | PXD051350 |

Loss of ATM causes R-loop-associated transcriptional dysregulation and attenuates the related response to DNA damage.

Not available

S-EPMC12906170 | biostudies-literature

TUG1-mediated R-loop resolution at microsatellite loci as a prerequisite for cancer cell proliferation.

Not available

S-EPMC10444773 | biostudies-literature

Gao-Zi-Yao improves learning and memory function in old spontaneous hypertensive rats.

Not available

S-EPMC9148521 | biostudies-literature