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ProteomicsThe S4-domain containing protein YlmH is involved in ribosome-associated quality control in Bacillus subtilis
By taking advantage of the strong genetic interactions between trans-translation and other ribosome rescue systems, we have employed a transposon sequencing (Tn-Seq) to identify potential novel rescue factors in Bacillus subtilis. In addition to the identification the ArfA-type rescue factor BrfA, a...
ORGANISM(S): Bacillus subtilis subsp. subtilis str. 168 
2024-09-16 | PXD049370 | Pride
Ylmh Translation Quality control 
UnknownA role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis.
Not available
S-EPMC11317155 | biostudies-literature
TranscriptomicsTranscriptome fine-mapping reveals FoxJ, a σE-dependent small RNA with unusual mRNA activation activity in Fusobacterium nucleatum
The oral commensal Fusobacterium nucleatum can spread to extra-oral sites where it is associated with pathologies as diverse as pre-term birth or cancer. Due to the evolutionary distance of F. nucleatum to other model bacteria, we lack a deeper understanding of RNA regulatory networks that allow thi...
ORGANISM(S): Fusobacterium nucleatum subsp. nucleatum ATCC 23726 
2024-02-08 | GSE249955 | GEO
ProteomicsTranscriptome fine-mapping in Fusobacterium nucleatum reveals FoxJ, a new σE-dependent small RNA with unusual mRNA activation activity
The oral commensal Fusobacterium nucleatum can spread to extra-oral sites where it is associated with diverse pathologies including pre-term birth and cancer. Due to the evolutionary distance of F. nucleatum to other model bacteria, we lack a deeper understanding of RNA regulatory networks that allo...
ORGANISM(S): Fusobacterium nucleatum subsp. nucleatum ATCC 23726 
2024-02-08 | PXD047655 | Pride
Fusobacterium  srna  sigma e post-transcriptional regulation 
UnknownTranscriptome fine-mapping in Fusobacterium nucleatum reveals FoxJ, a new σE-dependent small RNA with unusual mRNA activation activity.
Not available
S-EPMC11005410 | biostudies-literature
GenomicsTranscriptome fine-mapping reveals FoxJ, a σE-dependent small RNA with unusual mRNA activation activity in Fusobacterium nucleatum
Transcriptome fine-mapping reveals FoxJ, a σE-dependent small RNA with unusual mRNA activation activity in Fusobacterium nucleatum
PRJNA1051278 | ENA
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