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TranscriptomicsExpression profiling of p53-regulated genes by cDNA microarray analysis
To characterize the molecular features of p53 signaling pathway, we generated the gene-expression profiles of p53-introduced U373MG cells by genome-wide cDNA microarrays Keywords: time course U373MG cells were infected with 20 MOI of Ad-p53 or Ad-LacZ. mRNA from infected cells were collected at 0...
ORGANISM(S): Homo sapiens 
2010-05-05 | E-GEOD-14953 | biostudies-arrayexpress
TranscriptomicsClonal heterogeneity of mantle cell lymphoma revealed by array comparative genomic hybridization
The existence of clonal heterogeneity of mantle cell lymphoma based on genomic aberration evaluated by log2 ratio(clinical samples)
ORGANISM(S): Homo sapiens 
2012-07-30 | E-MTAB-1076 | biostudies-arrayexpress
GenomicsDATASET_CS_WGS_VCF - samples
Indel/point mutation of chondrosarcoma
EGAD00001000874 | EGA
GenomicsDATASET_CS_WGS_RUN - samples
Fastq files of 10 samples of condrosarcoma
EGAD00001000873 | EGA
GenomicsWhole genome sequencing of chondrosarcoma
Massive parallel sequencing of 10 chondrosarcoma genomes was conducted to identify somatic mutations, structural alterations including fusion genes and mutation signatures that may help to comprehensively characterize the molecular features.
EGAS00001000505 | EGA
Genomicsena-DATASET-CGP-UT-20-03-2015-01:02:52:882-534 - samples
Description not provided
EGAD00001001302 | EGA
GenomicsWhole-exome sequencing of Fanconi anemia
We performed whole-exome sequencing of two Fanconi anemia patients without mutation of known FA genes, and identified a novel FA gene FANCT.
EGAS00001001103 | EGA
GenomicsDepartment of Pathology and Tumor Biology, Kyoto University Data Access Committee
Data Access Committee EGAC00001000150
EGAC00001000150 | EGA
ProteomicsSecretome protein enrichment with click sugars (SPECS) analysis on primary neurons cultured from embryos derived from pregnant mice treated with or without valproic acid
Autism Spectrum Disorder (ASD) is a developmental disorder characterized by impaired social communication and repetitive behaviors. In recent years, a pharmacological mouse model of ASD involving maternal administration of valproic acid (VPA) has become widely used. Newborn pups in this model show a...
ORGANISM(S): Mus Musculus (mouse) 
2024-10-26 | PXD042099 | JPOST Repository
ProteomicsProteome and peptidome analyses of mouse caecal contents and Paraprevotella clara culture supernatants
Caecal contents from three specific pathogen-free (SPF) mice, and three germ-free (GF) mice were analyzed by DIA-MS (SWATH-MS) using TripleTOF 5600+ (SCIEX). Paraprevotella clara (P. clara) culture supernatants nontreated and treated tunicamycin or 2-fluro-L-fucose (2F-Fuc) were analyzed by DIA-MS u...
ORGANISM(S): Paraprevotella Clara Mus Musculus (mouse) 
2022-06-29 | PXD027678 | JPOST Repository
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