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GenomicsGenetic and Functional Drivers of Diffuse Large B Cell Lymphoma
Diffuse large B cell lymphoma (DLBCL) is the most common hematologic malignancy and is characterized by a striking degree of heterogeneity. We enrolled a total of 1001 DLBCL patients and comprehensively defined the landscape of genetic mutations, copy number alterations and expression through whole-...
EGAS00001002606 | EGA
ProteomicsZhang_DDAnoDE_APMS_MSPLIT_P63_6600
This dataset consists of 9 raw MS files and associated peak lists and results files, acquired on AB Sciex TripleTOF 6600 mass spectrometer operated in Data Independent Acquisition mode. Samples were generated by Dushyandi Rajendran and Shen Zhang. Mass spectrometry acquisition was performed by Shen...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2022-02-17 | MSV000088855 | MassIVE
ProteomicsShenZhang_DDAnoDE_APMS_P63_6600
This dataset consists of 9 raw MS files and associated peak lists and results files, acquired on AB Sciex TripleTOF 6600 mass spectrometer operated in Data Dependent Acquisition mode. Samples were generated by Dushyandi Rajendran and Shen Zhang. Mass spectrometry acquisition was performed by Shen Z...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2022-02-17 | MSV000088853 | MassIVE
ProteomicsZhang_DDAnoDE_APMS_noDE_P63_6600
This dataset consists of 9 raw MS files and associated peak lists and results files, acquired on AB Sciex TripleTOF 6600 mass spectrometer operated in Data Dependent Acquisition mode. Samples were generated by Dushyandi Rajendran and Shen Zhang. Mass spectrometry acquisition was performed by Shen Z...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2022-02-17 | MSV000088854 | MassIVE
TranscriptomicsEpigenome analysis of aging muscle progenitors
Genome wide DNA methylation profiling of muscle cells extracted from healthy donors at different ages. The Illumina Infinium Human Methylation 450 BeadChip was used to obtain DNA methylation profiles across > 485,000 methylation sites. The muscle cells were extracted from young adults (18-40 years ...
ORGANISM(S): Homo sapiens 
2015-05-01 | E-GEOD-53302 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of bursa of Fabricius from genetically resistant and susceptible chickens infected with Infectious Bursal Disease Virus (IBDV)
We used a chicken immune-targeted gene array to analyse the differences in gene expression in the bursa of Fabricius from genetically resistant and susceptible animals infected with Infectious Bursal Disease Virus (IBDV).
ORGANISM(S): Gallus gallus 
2006-10-19 | E-MEXP-756 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human prostate cancer cell line to determine Ebp1 effect in prostate cancer
Therapies targeting the androgen receptor are critical for treatment of hormone refractory prostate cancer. We have previously demonstrated that Ebp1, a protein isolated by its ability to bind ErbB3, is a downstream effector of heregulin activated pathways and an AR corepressor. As Ebp1 is decreased...
ORGANISM(S): Homo sapiens 
2008-11-13 | E-GEOD-12200 | biostudies-arrayexpress
Genomicsena-DATASET-DAVELAB-01-09-2017-13:58:58:766-116 - samples
Exome sequencing data for 1001 DLBCL patients and RNA sequencing data for 775 DLBCL patients
EGAD00001003600 | EGA
TranscriptomicsNovel roles of C. elegans heterochromatin protein HP1 and linker histone HIS-24 in the regulation of innate immune gene expression and stress Response
Linker histone H1 and heterochromatin protein 1 (HP1) are essential components ofheterochromatin which contribute to the transcriptional repression of genes. It has been shown that the methylation mark on the histone H1 serves as a specific recognition code for the chromodomain of HP1, however, the ...
ORGANISM(S): Caenorhabditis elegans 
2011-11-28 | E-GEOD-25714 | biostudies-arrayexpress
MetabolomicsSerum-based metabolomics characterization of pigs treated with ractopamine
A study was performed to determine if serum-metabolomics could be used to establish a predictive tool for identifying ractopamine misuse in pigs. Ractopamine, a beta-agonist used as growth promoter in livestock, is with great controversy, and it has been forbidden in most countries worldwide. Howeve...
2017-06-12 | MTBLS384 | MetaboLights
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