Yuan Q Q - OmicsDI

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Unknown (9618)
Proteomics (375)
Transcriptomics (155)
Metabolomics (61)
Genomics (49)
Other (6)
Multiomics (2)

Organisms

Homo sapiens (242)
Mus musculus (119)
Rhizobium leguminosarum (26)
Rattus norvegicus (10)
Arabidopsis thaliana (9)
Streptomyces venezuelae (8)
Saccharomyces cerevisiae (8)
Drosophila melanogaster (8)
Danio rerio (7)
Escherichia coli (7)
Streptomyces coelicolor (4)
Oryza sativa (3)
Zea mays (2)
Triticum aestivum (2)
Staphylococcus aureus (2)
Acromyrmex echinatior (1)
Deinococcus gobiensis (1)
Campylobacter (1)
Tetrahymena thermophila (1)
Streptomyces clavuligerus (1)
Escherichia coli str. K-12 substr. W3110 (1)
Clonorchis sinensis (1)
Pan paniscus (1)
Streptomyces coelicolor A3(2) (1)
Campylobacter jejuni (1)
Populus trichocarpa (1)
Vitis vinifera (1)
mixed sample (1)
Populus tremula x Populus alba (1)
Oryza sativa Japonica Group (1)

Organisms

Homo sapiens (1)

Repository

pride (221)
biostudies-arrayexpress (172)
iProX (115)
MetaboLights (57)
MassIVE (40)
EGA (29)
GNPS (3)
PeptideAtlas (3)
NODE (2)
ENA (2)
geo (1)
GPMDB (1)

Tissue

Cell culture (58)
Epithelial cell (20)
Brain (18)
Permanent cell line cell (9)
Blood plasma (8)
Stem cell (8)
Bone marrow (7)
Heart (7)
Macrophage (7)
Blood (6)
Blood cell (6)
Cell suspension culture (6)
Embryonic stem cell (5)
Liver (5)
Leaf (4)
Lung (4)
Plant cell (4)
Testis (4)
Blood serum (3)
Embryo (3)
Fibroblast (3)
HeLa cell (3)
Primary cell (3)
Tendon (3)
Whole body (3)
Male Reproductive System (2)
Abscission zone (2)
Colon (2)
Early embryonic cell (2)
Others (1)

Disease

Colon cancer (6)
Disease free (6)
Acute leukemia (5)
Alzheimer's disease (4)
Cervix carcinoma (4)
Glioblastoma (4)
Malaria (4)
Breast cancer (3)
Influenza (2)
Liver carcinoma (2)
Mixed disorder as reaction to stress (2)
Prostate adenocarcinoma (2)
Colorectal carcinoma (1)
Not Available (1)
Alopecia (1)
COVID-19 (1)
Cardiovascular system disease (1)
Esophageal carcinoma (1)
Liver cancer (1)
Lung carcinoma (1)
Lung carcinoma in situ (1)
Machado-Joseph disease (1)
Myelodysplastic syndrome (1)
Nephrolithiasis (1)
Neuroblastoma (1)
Osteoarthritis (1)
Osteoporosis (1)
Pancreatic cancer (1)
Pancreatic ductal adenocarcinoma (1)
Primary immunodeficiency disease (1)

Technology Type

Mass Spectrometry (221)
Shotgun proteomics (103)
Bottom-up proteomics (44)
Mass spectrometry (38)
Mass spectrometry assay (19)
Affinity purification coupled with mass spectrometry proteomics (18)
Gel-based experiment (18)
Data-dependent acquisition (17)
Top-down proteomics (15)
SWATH MS (10)
Data-independent acquisition (9)
Affinity proteomics (3)
All-ion fragmentation (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
DiaPASEF (2)
Olink affinity proteomics (2)
SRM/MRM (2)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Mass spectrometry imaging (1)
Metaproteomics (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (16)
Liquid Chromatography MS - negative - reverse phase (15)
Q Exactive (11)
Illumina HiSeq 2000 (10)
Liquid Chromatography MS - negative - reverse-phase (10)
Liquid Chromatography MS - positive - reverse-phase (10)
Q Exactive Plus (5)
Q Exactive HF (3)
LTQ Orbitrap Velos (3)
6545 Q-TOF LC/MS (2)
10x Chromium (1)
NextSeq 550 (1)
Instrument (1)
6530A Q-TOF LC/MS (1)
6530B Q-TOF LC/MS (1)
Bruker maXis ESI Quadrupole TOF (1)
Exactive Plus (1)
GC/Q-TOF (1)
LTQ Orbitrap (1)
LTQ Orbitrap XL (1)
LTQ XL (1)
Orbitrap Exploris 240 (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion (1)
Q Exactive HF-X (1)
Synapt G2-S HDMS (1)
Synapt MS (1)
Thermo Scientific Ultimate 3000 UHPLC coupled to Thermo Scientific Q-Exactive equipped with a HESI-II probe (1)
Xevo G2 Q-Tof (1)
ZenoTOF 7600 (1)

Publication Date

2025 (70)
2026 (64)
2022 (64)
2024 (56)
2023 (52)
2021 (42)
2013 (39)
2010 (34)
2020 (28)
2019 (25)
2014 (25)
2018 (19)
2015 (19)
2016 (15)
2011 (13)
2012 (12)
2017 (11)
2009 (10)
2008 (10)
2007 (2)

UNIPROT ID/AC

A0A024R563 (3)
A0A087WTX5 (3)
A0A087WYL9 (3)
A0A087X130 (3)
A0A087X1V9 (3)
A0A0A0MS07 (3)
A0A0A0MSA7 (3)
A0M8Q6 (3)
A0MZ66 (3)
A2NUT2 (3)
A5A3E0 (3)
A6NNZ2 (3)
B4DPR2 (3)
B4E3A4 (3)
B7Z2G3 (3)
B7Z2U2 (3)
B7Z9B7 (3)
B7ZME8 (3)
B9A064 (3)
C9JM50 (3)
C9JSZ1 (3)
C9JZR2 (3)
D6RE86 (3)
E5RK69 (3)
E7EVA0 (3)
E9PFZ2 (3)
E9PRE2 (3)
H0Y2V6 (3)
H0Y5B0 (3)
H0Y5C6 (3)

ENSEMBL ID

ENSG00000170477 (3)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000147251 (1)
ENSG00000204131 (1)

CHEBI ID

CHEBI:16040 (16)
CHEBI:15354 (15)
CHEBI:17568 (15)
CHEBI:16704 (14)
CHEBI:17154 (14)
CHEBI:17405 (14)
CHEBI:30769 (14)
CHEBI:7916 (14)
CHEBI:16737 (13)
CHEBI:17015 (13)
CHEBI:17368 (13)
CHEBI:17895 (13)
CHEBI:15756 (12)
CHEBI:16543 (12)
CHEBI:16708 (12)
CHEBI:17351 (12)
CHEBI:17596 (12)
CHEBI:30805 (12)
CHEBI:15891 (11)
CHEBI:15956 (11)
CHEBI:16015 (11)
CHEBI:16335 (11)
CHEBI:16359 (11)
CHEBI:16828 (11)
CHEBI:16857 (11)
CHEBI:16919 (11)
CHEBI:17203 (11)
CHEBI:17361 (11)
CHEBI:17562 (11)
CHEBI:17748 (11)

Metabolite Name

Adenine (12)
Creatinine (11)
Cytosine (11)
Palmitic acid (11)
Uracil (11)
Uridine (10)
4-Pyridoxic acid (9)
Adenosine (9)
Betaine (9)
Guanine (9)
Hippuric acid (9)
Indole (9)
Inosine (9)
L-Tyrosine (9)
N-Acetylputrescine (9)
Azelaic acid (8)
Choline (8)
L-Lysine (8)
L-Phenylalanine (8)
L-Tryptophan (8)
L-Valine (8)
Linoleic acid (8)
Nicotinamide (8)
Sebacic acid (8)
Thymidine (8)
Uric acid (8)
Allantoin (7)
Cholic acid (7)
Citraconic acid (7)
Citric acid (7)

First Public Date

2023 (1)
2019 (1)

Modification

15.994915 (1)
57.021464 (1)
N6 (1)
Not available (1)

Study type

Transcription profiling by array (106)
RNA-seq of coding RNA (23)
ChIP-seq (12)
Unknown experiment type (7)
Methylation profiling by high throughput sequencing (6)
RNA-seq of non coding RNA (5)
High-throughput sequencing (4)
ChIP-chip by tiling array (2)
Comparative genomic hybridization by array (2)
Methylation profiling by array (2)
ChIP-chip by array (1)
Other (1)
Single nucleus RNA sequencing (1)

Release Date

2025 (1558)
2022 (1336)
2024 (1308)
2023 (1268)
2021 (1021)
2020 (749)
2019 (489)
2018 (430)
2017 (333)
2016 (297)
2026 (233)
2015 (206)
2014 (162)
2013 (112)
2010 (72)
2012 (66)
2011 (62)
2009 (37)
2008 (26)
2007 (5)
2005 (4)
2003 (4)
2006 (3)
2001 (2)
1999 (2)
2004 (1)
2002 (1)
2000 (1)
1998 (1)
1997 (1)

Lab affiliation

Peking University First Hospital (3)
Zhejiang University (3)
Acupuncture and Tuina School/Third Teaching Hospital, Chengdu University of Traditional Chinese Medicine (2)
Center for Proteomics & Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (2)
China Agricultural University (2)
College of Agronomy, Jiangxi Agricultural University (2)
Department of Biochemistry and Structural Biology and Center for Innovative Drug Discovery School of Medicine, University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Drive, San Antonio, TX 78229, United States (2)
Guangxi University (2)
Huazhong Agricultural University (2)
Huazhong University of Science and Technology (2)
Institute of Zoology, Chinese Academy of Sciences (2)
Key Laboratory of Brain Functional Genomics of Shanghai and Ministry of Education, Institute of Brain Functional Genomics, School of Life Science and the Collaborative Innovation Center for Brain Science, East China Normal University, Shanghai, China (2)
Lab of Jie Zheng, Neuroscience Research Institute and Department of Neurobiology, School of Basic Medical Sciences, Peking University, Beijing 100083, P.R. China (2)
School of Life Sciences, Xiamen University (2)
School of Pharmacy, University of Wisconsin-Madison (UW-Madison) (2)
Shanghai Jiao Tong University Affiliated Sixth People's Hospital (2)
St Jude Children's Research Hospital (2)
State Key Laboratory of Oncology in South China (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
Sun Yat-sen University (2)
The Bone Biology and Disease Laboratory, School of Biomedical Sciences, The University of Western Australia (2)
The First Affiliated Hospital of Fujian Medical University (2)
"Institute of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Guangzhou 510006, China" (1)
1 Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. 2 Center of Clinical Oncology, The Affiliated Hospital of Xuzhou Medical University, Xuzhou, China. 3 State Key Laboratory Jiangsu Center for the Collaboration and Innovation of Cancer Biotherapy, Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. (1)
1. Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, USA 2. UPMC Hillman Cancer Center, Pittsburgh, PA, USA 3. Department of Neurology, University of Pittsburgh, Pittsburgh, PA, USA 4. Department of Neurology, University of North Carolina, Chapel Hill, NC, USA (1)
1. Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, USA 2. UPMC Hillman Cancer Center, Pittsburgh, PA, USA 3. Department of Neurology, University of Pittsburgh, Pittsburgh, PA, USA 4. Department of Neurology, University of North Carolina, Chapel Hill, NC, USA (lab head) (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China 3.Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
1.Hunan Key Laboratory of Molecular Precision Medicine, Department of Oncology, Xiangya Hospital & Center for Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan, China (1)
13998905918 (1)

Tags

xref:PubMed:26220187 (1)
xref:PubMed:37443829 (1)

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The Genome of Medicinal Plant Macleaya cordata Provides New Insights into Benzylisoquinoline Alkaloids Metabolism

The overuse of antibiotics in animal agriculture and medicine has caused a series of potential threats to public health. Macleaya cordata is a medicinal plant species from the Papaveraceae family, providing a safe resource for the manufacture of antimicrobial feed additive for livestock. The active ...

2017-04-24 | MTBLS435 | MetaboLights

Social Q&A communities: A multi-factor study of the influence of users' knowledge sharing behaviors.

Not available

S-EPMC9556872 | biostudies-literature

Responses of Physiology, Photosynthesis, and Related Genes to Saline Stress in Cornus hongkongensis subsp. tonkinensis (W. P. Fang) Q. Y. Xiang.

Not available

S-EPMC9002922 | biostudies-literature

Measuring the Impact of Surgical and Non-surgical Facial Cosmetic Interventions Using FACE-Q Aesthetic Module Scales: A Systematic Review and Meta-Analysis.

Not available

S-EPMC11562317 | biostudies-literature

Quantification of volumetric thigh and paravertebral muscle fat content: comparison of quantitative Dixon (Q-Dixon) magnetic resonance imaging (MRI) with high-speed T₂-corrected multiecho MR spectroscopy.

Not available

S-EPMC11250322 | biostudies-literature

Metabonomic analysis of human and 12 kinds of livestock mature milk

Mature milk, as a nutrient-rich endogenous metabolite, has various beneficial effects on the human body. In order to investigate the specific nutrients provided by different dairy products to humans, we used UHPLC-Q-TOF MS to analyze the highly significantly differentially expressed metabolites i...

2023-08-21 | MTBLS6777 | MetaboLights

Label-free quantitative proteomics of Drosophila melanogaster cells across different time points

This project involves a label-free quantitative proteomics analysis of Drosophila melanogaster using Data Independent Acquisition (DIA) mode on a Q-Exactive HF X mass spectrometer. The study includes 36 samples derived from glia cells (G) , S2 cells (S) and muscle cells (m).

ORGANISM(S): Drosophila melanogaster (Fruit fly)

2026-10-23 | PXD081430 | Pride

Dia Swath Q-exactive hf x Label-free quantification Drosophila melanogaster Glia

Meta-Analysis of Single-Cell RNA-Seq Data Reveals the Mechanism of Formation and Heterogeneity of Tertiary Lymphoid Organ in Vascular Disease.

Not available

S-EPMC10521807 | biostudies-literature

Cooperation between CYB5R3 and NOX4 via coenzyme Q mitigates endothelial inflammation.

Not available

S-EPMC8577475 | biostudies-literature

Identification of absorbed constituents and evaluation of the pharmacokinetics of main compounds after oral administration of yindanxinnaotong by UPLC-Q-TOF-MS and UPLC-QqQ-MS.

Not available

S-EPMC9080097 | biostudies-literature

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10264 Results

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Organisms

Organisms

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Tissue

Disease

Technology Type

Instrument Platform

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UNIPROT ID/AC

ENSEMBL ID

CHEBI ID

Metabolite Name

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Study type

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