Yue Yue Y - OmicsDI

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Unknown (5358)
Proteomics (313)
Genomics (66)
Transcriptomics (65)
Metabolomics (25)

Organisms

Homo sapiens (253)
Mus musculus (97)
Oryza sativa (7)
Saccharomyces cerevisiae (5)
Rattus norvegicus (5)
Drosophila melanogaster (5)
Escherichia coli (5)
Arabidopsis thaliana (3)
Ovis aries (2)
Larimichthys crocea (2)
Bos taurus (2)
Caenorhabditis elegans (2)
Candida tropicalis MYA-3404 (1)
Camellia sinensis (1)
Brassica oleracea (1)
Leptospira interrogans serovar Lai str. 56601 (1)
Zea mays (1)
Streptococcus pneumoniae (1)
Setaria italica (1)
Oryza sativa Japonica Group (1)
Sus scrofa (1)
Agapanthus praecox (1)
Bacillus altitudinis (1)
Bufo gargarizans gargarizans (1)
Cricetulus griseus (1)
Human alphaherpesvirus 1 (1)
Lactuca sativa (1)
Macaca fascicularis fascicularis (1)
Nannochloropsis oceanica (1)
Nicotiana benthamiana (1)

Repository

iProX (146)
pride (143)
biostudies-arrayexpress (84)
EGA (46)
MetaboLights (25)
MassIVE (16)
jPOST (4)
PanoramaPublic (2)
PAXDB (2)
NODE (1)

Tissue

Cell culture (59)
Epithelial cell (7)
Brain (6)
Permanent cell line cell (6)
Blood plasma (5)
Stem cell (5)
Blood serum (4)
Embryonic stem cell (4)
Liver (4)
Whole body (4)
Macrophage (3)
Plant cell (3)
Root (3)
Shoot (3)
Testis (3)
Bone marrow (2)
Lung (1)
Adipose tissue (1)
Adipose tissue of abdominal region (1)
Blood cell (1)
Brown adipose tissue (1)
Cell line cell (1)
Cerebrospinal fluid (1)
Cervical squamo-columnar junction (1)
Colon (1)
Cotyledon (1)
Culture condition:beech wood-grown cell (1)
Egg (1)
Epithelium of left lung (1)
Flower (1)

Disease

Disease free (4)
Breast cancer (2)
Colon cancer (2)
Normal (1)
Cervical cancer (1)
Hepatocellular carcinoma (1)
Long COVID (1)
Malignant neoplasm of ovary (1)
Non-small cell lung carcinoma (1)
Parkinson's disease (1)
Prostate adenocarcinoma (1)
Severe acute respiratory syndrome (1)
Skin melanoma (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (143)
Shotgun proteomics (77)
Mass spectrometry (23)
Bottom-up proteomics (19)
Data-independent acquisition (13)
Affinity purification coupled with mass spectrometry proteomics (10)
Data-dependent acquisition (8)
Gel-based experiment (8)
Top-down proteomics (8)
SWATH MS (5)
Mass spectrometry assay (2)
HDMSE (2)
Proteogenomics (2)
SRM/MRM (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Affinity proteomics (1)
All-ion fragmentation (1)
Immunopeptidomics (1)
Olink affinity proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (11)
Liquid Chromatography MS - negative - reverse phase (9)
Q Exactive (4)
Q Exactive HF (3)
Q Exactive HF-X (3)
6540 Q-TOF LC/MS (Agilent) (3)
Illumina HiSeq 2500 (2)
LTQ Orbitrap Elite (2)
Orbitrap Exploris 480 (2)
HiSeq X Ten (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap Velos (1)
Orbitrap Astral (1)
Orbitrap Eclipse (1)
Orbitrap Fusion ETD (1)
Orbitrap Fusion Lumos (1)
Q Exactive Plus (1)
Velos Plus (1)
5975C Series GC/MSD (Agilent) (1)
Agilent GC/MS, LECO GC/TOFMS (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
TSQ Quantum GC (Thermo Scientific) (1)
UPLC Q-TOF Premier (Waters) (1)
Xevo G2 QTOF (Waters) (1)
Xevo QTof MS (Waters) (1)

Publication Date

2021 (61)
2022 (55)
2024 (49)
2025 (48)
2023 (40)
2026 (29)
2014 (20)
2020 (20)
2013 (17)
2015 (13)
2010 (13)
2012 (12)
2019 (12)
2016 (9)
2017 (8)
2011 (6)
2018 (6)
2008 (1)
2007 (1)

UNIPROT ID/AC

1FEH1_WHEAT (2)
4565.Traes_1AL_3CF82DD08.2 (2)
4565.Traes_1AL_3FDB6FDB4.1 (2)
4565.Traes_1AL_44FB362A9.2 (2)
4565.Traes_1AL_4E621A250.2 (2)
4565.Traes_1AL_51D597B92.1 (2)
4565.Traes_1AL_52E56C8D3.1 (2)
4565.Traes_1AL_53F3380AF.1 (2)
4565.Traes_1AL_5E2C30B46.1 (2)
4565.Traes_1AL_6B64D0E80.1 (2)
4565.Traes_1AL_72202D9DF.1 (2)
4565.Traes_1AL_738358449.1 (2)
4565.Traes_1AL_78CB13657.2 (2)
4565.Traes_1AL_7B509569F.1 (2)
4565.Traes_1AL_7CF571E9F.1 (2)
4565.Traes_1AL_7D6DC73FC.2 (2)
4565.Traes_1AL_9C2D7A0A6.1 (2)
4565.Traes_1AL_9EFC68149.1 (2)
4565.Traes_1AL_A47D32D30.1 (2)
4565.Traes_1AL_A69755144.1 (2)
4565.Traes_1AL_B15921488.1 (2)
4565.Traes_1AL_BAAF4391C.1 (2)
4565.Traes_1AL_BAB3D977B.1 (2)
4565.Traes_1AL_D06A380E9.2 (2)
4565.Traes_1AL_D39C4F23A.2 (2)
4565.Traes_1AL_D789B5634.1 (2)
4565.Traes_1AL_D8B97BD8D.1 (2)
4565.Traes_1AL_D8FE82B94.1 (2)
4565.Traes_1AL_E07235CF1.1 (2)
4565.Traes_1AL_EEB8BBB6B.1 (2)

CHEBI ID

CHEBI:17154 (10)
CHEBI:30769 (10)
CHEBI:16708 (9)
CHEBI:16750 (9)
CHEBI:17509 (9)
CHEBI:17568 (9)
CHEBI:18257 (9)
CHEBI:15354 (8)
CHEBI:15682 (8)
CHEBI:15756 (8)
CHEBI:15891 (8)
CHEBI:16040 (8)
CHEBI:16196 (8)
CHEBI:16335 (8)
CHEBI:16704 (8)
CHEBI:16737 (8)
CHEBI:16865 (8)
CHEBI:16919 (8)
CHEBI:17015 (8)
CHEBI:17368 (8)
CHEBI:17562 (8)
CHEBI:17596 (8)
CHEBI:17752 (8)
CHEBI:17822 (8)
CHEBI:17964 (8)
CHEBI:18211 (8)
CHEBI:27266 (8)
CHEBI:28716 (8)
CHEBI:29016 (8)
CHEBI:7916 (8)

Metabolite Name

Guanine (6)
N6-Acetyl-L-lysine (6)
Ornithine (6)
Pipecolic acid (6)
Spermidine (6)
Taurine (6)
Uracil (6)
Argininosuccinic acid (5)
Creatine (5)
Creatinine (5)
Cytosine (5)
Guanosine (5)
Indole (5)
Inosine (5)
Thymine (5)
Valine (5)
4-Pyridoxic acid (4)
AMP (4)
Adenine (4)
Adenosine (4)
Arginine (4)
Asparagine (4)
Betaine (4)
Carnosine (4)
Choline (4)
Dodecanoic acid (4)
Hypoxanthine (4)
L-Phenylalanine (4)
N-Acetylornithine (4)
Niacinamide (4)

Study type

Transcription profiling by array (30)
RNA-seq of coding RNA (18)
Methylation profiling by high throughput sequencing (10)
ChIP-seq (9)
Other (5)
Unknown experiment type (4)
Comparative genomic hybridization by array (3)
Animal - High-throughput sequencing (2)
Transcription profiling by tiling array (2)
ChIP-chip by tiling array (1)

Release Date

2025 (834)
2022 (745)
2024 (711)
2023 (686)
2021 (524)
2020 (413)
2019 (295)
2018 (241)
2017 (194)
2016 (167)
2015 (140)
2026 (138)
2014 (108)
2013 (70)
2012 (44)
2011 (42)
2010 (38)
2009 (18)
2008 (10)
2007 (9)
2006 (4)
2005 (4)
2004 (3)
2003 (2)
2001 (1)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (35)
University of Minnesota at Twin Cities (7)
University of Minnesota (6)
Center for Alzheimer's and Related Dementias (CARD), NIA and NINDS, NIH, Bethesda, Maryland, USA. (2)
Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China. (2)
Department of Structural Biology and Developmental Neurobiology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (2)
Institute of Marine Sciences and Guangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou 515063, China (2)
Key Laboratory of Rare and Uncommon Diseases, Department of Microbiology, Institute of Basic Medicine, Shandong First Medical University & Shandong Academy of Medical Sciences (2)
Nankai University (2)
State Key Laboratory of Medical Molecular Biology, Department of Biochemistry and Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing 100005, China (2)
State Key Laboratory of Medical Molecular Biology, Department of Biochemistry and Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing 100005, China. (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
1 Department of General Surgery, The 306th Hospital of PLA-Peking University Teaching Hospital, Beijing 100101, China 2 Department of General Surgery, Strategic Support Force Medical Center, Beijing 100101, China (1)
1. Nephrology Department of Guilin No. 924 Hospital, Guangxi Key laboratory of Metabolic Diseases Research, Guilin Key laboratory of Kidney Diseases Research, 541002, Guilin, Guangxi, People’s Republic of China. 2. Clinical Medical Research Center, the Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital), 518020, Shenzhen, Guangdong, People’s Republic of China. (1)
Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology (1)
Beijing Institute of Genomics, Chinese Academy of Sciences, China National Center for Bioinformation (1)
Ben May Department for Cancer Research, the University of Chicago, Chicago, IL 60637, USA. (1)
Binzhou Medical University Hospital (1)
Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (1)
Capital Medical University and Shanghai GeneChem Co., Ltd (1)
Center for Alzheimer's and Related Dementias (CARD), National Institute on Aging and National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA. (1)
Center for Alzheimer’s and Related Dementias, National Institutes of Health, Bethesda, MD, USA (1)
Cheeloo Medical College, Shandong University, Jinan, Shandong, China (1)
China,Hunan Agricultural University,College of Agriculture (1)
Chinese Academy of Agricultural Sciences (1)
College of Life Sciences, Wuhan University (1)
College of Pharmceutial Science, Zhejiang University of Technology (1)
Dalian Ocean University, China. 116023 (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China (1)
Department of Animal Sciences, Purdue University, West Lafayette, IN 47907, USA Center for Cancer Research Purdue University, West Lafayette, IN 47907, USA (1)

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Tracing Bai-Yue Ancestry in Aboriginal Li People on Hainan Island.

Not available

S-EPMC9585476 | biostudies-literature

Clustering analysis of Yue opera character tone trends based on quantum particle swarm optimization for fuzzy C-means.

Not available

S-EPMC11760033 | biostudies-literature

TMT Screening of Human Samples:SiHa cell

A screen for APOA1 downstream proteins affecting platinum-based chemoresistance using Tandem Mass Tag revealed 64 differentially expressed proteins in SiHa cells, which were subjected to Gene Ontology (annotation, Kyoto Encyclopedia of Genes and Genomes enrichment, subcellular localization, structur...

ORGANISM(S): Cancer

2022-05-20 | PXD030885 | Pride

Genome-Wide Analysis of ZAT Gene Family in Osmanthus fragrans and the Function Exploration of OfZAT35 in Cold Stress.

Not available

S-EPMC10305554 | biostudies-literature

Exploring barriers to and facilitators of the implementation of home rehabilitation care for older adults with disabilities using the Consolidated Framework for Implementation Research (CFIR).

Not available

S-EPMC10183114 | biostudies-literature

Genome-Wide Identification and Functional Analysis of the Calcineurin B-like Protein and Calcineurin B-like Protein-Interacting Protein Kinase Gene Families in Chinese Cabbage (Brassica rapa ssp. pekinensis).

Not available

S-EPMC9140732 | biostudies-literature

Do Soil pH Levels Drive the Responses of Catalase Activity and Bacterial Communities to Microplastics? A Case Study in Mollisols.

Not available

S-EPMC12736934 | biostudies-literature

The gut microbiota modulator berberine ameliorates collagen-induced arthritis in rats by facilitating the generation of butyrate and adjusting the intestinal hypoxia and nitrate supply.

Not available

S-EPMC6902671 | biostudies-literature

A new infrageneric classification of Gastrochilus (Orchidaceae: Epidendroideae) based on molecular and morphological data.

Not available

S-EPMC11390603 | biostudies-literature

ChIP-chip analysis of HTZ-1 and RNA Polymerase II in wildtype (N2) embryos

In all eukaryotes, histone variants are incorporated into a subset of nucleosomes to create functionally specialized regions of chromatin. One such variant, H2A.Z, replaces histone H2A and is required for viability in all metazoans tested to date. However, the function of H2A.Z in chromatin organiza...

ORGANISM(S): Caenorhabditis elegans

2010-05-25 | E-GEOD-10201 | biostudies-arrayexpress

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5827 Results

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