Zhang Liang L - OmicsDI

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Unknown (8200)
Transcriptomics (779)
Proteomics (281)
Genomics (148)
Metabolomics (96)
Multiomics (6)
Models (1)

Organisms

Homo sapiens (478)
Mus musculus (283)
Arabidopsis thaliana (61)
Drosophila melanogaster (20)
Saccharomyces cerevisiae (20)
Rattus norvegicus (19)
Escherichia coli (18)
Danio rerio (13)
Oryza sativa (13)
Zea mays (12)
Enterococcus faecium (8)
Caenorhabditis elegans (8)
Macaca mulatta (7)
Oryza sativa Japonica Group (7)
Schizosaccharomyces pombe (4)
Gallus gallus (4)
Sus scrofa (4)
Bombyx mori (3)
Mycobacterium tuberculosis (3)
Candida albicans (3)
Aplysia californica (2)
Gossypium hirsutum (2)
Locusta migratoria (2)
Biomphalaria glabrata (2)
Campylobacter jejuni (2)
Glycine max (2)
Escherichia coli str. K-12 substr. MG1655 (2)
Sphingomonas sp. ATCC 31555 (1)
Iridovirus (1)
Trametes versicolor (1)

Repository

biostudies-arrayexpress (898)
iProX (151)
pride (116)
MetaboLights (92)
EGA (31)
MassIVE (7)
GNPS (4)
PeptideAtlas (3)
jPOST (2)
PAXDB (2)
Cell Collective (1)

Tissue

Cell culture (35)
Epithelial cell (7)
Liver (7)
Blood cell (6)
Blood (5)
Embryo (4)
Hepatocyte (4)
Leaf (4)
Macrophage (4)
Permanent cell line cell (4)
Skin (4)
T cell (4)
Whole body (4)
Others (3)
Testis (3)
Blood plasma (2)
Brain (2)
Embryonic stem cell (2)
HeLa cell (2)
Kidney (2)
Placenta (2)
Plant cell (2)
Posterior silk gland (2)
Primary cell (2)
Stem cell (2)
A549-CR cell (1)
Anther (1)
B cell (1)
Bone marrow (1)
Colon (1)

Disease

Disease free (6)
Colon cancer (4)
Acute leukemia (3)
Normal (2)
Malaria (2)
Endometrioid carcinoma (1)
Raji Burkitt's lymphoma (1)
Pancreatic tumor (1)
Cirrhosis (1)
Melanoma (1)
Prostate cancer (1)
Adult hepatocellular carcinoma (1)
Age related macular degeneration (1)
Brain cancer (1)
Cholangiocarcinoma (1)
Osteosarcoma (1)
Pancreatic cancer (1)
Renal cell carcinoma (1)
Severe acute respiratory syndrome (1)
Thyroid cancer (1)
Type 2 diabetes mellitus (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (116)
Mass spectrometry (74)
Shotgun proteomics (55)
Affinity purification coupled with mass spectrometry proteomics (18)
Mass spectrometry assay (16)
Bottom-up proteomics (12)
Gel-based experiment (11)
Data-dependent acquisition (10)
Chemical cross-linking coupled with mass spectrometry proteomics (8)
Top-down proteomics (7)
NMR spectroscopy (3)
Illumina HiSeq 2000 (2)
Illumina HiSeq 2000, ILLUMINA (2)
Data-independent acquisition (2)
Proteogenomics (2)
Illumina HiSeq 2500 (1)
AB SOLiD System 3.0 (1)
Illumina HiSeq 2000, Illumina_2.5M (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
HDMSE (1)
Mass spectrometry imaging (1)
SRM/MRM (1)

Instrument Platform

Illumina NovaSeq 6000 (19)
Illumina HiSeq 2000 (12)
Illumina HiSeq 2500 (10)
NextSeq 500 (7)
Illumina HiSeq 4000 (4)
NextSeq 550 (3)
MA900, Sony (2)
10x Chromium Controller (2)
Illumina Genome Analyzer II (2)
Illumina iScan microarray scanner (1)
PureLink RNA Mini Kit (1)
Illumina TruSeq (1)
10X Chromium Controller (1)
Agilent Surescan High Resolution DNA microarray Scanner (1)
Beadarray reader (1)
Illumina iScan (1)
Agilent Surescan High Resolution DNA Microarray Scanner (1)
Chemostat (1)
Affymetrix Fluidics Station 400 (1)
Axon GenePix 4000B scanning hardware (1)
Illumina NovaSeq X (1)
NA (1)
Illumina HiSeq 1000 (1)
DNBSEQ-T7 (1)
BGISEQ-500 (1)
Illumina MiSeq (1)
Illumina HiSeq 1500 (1)
Illumina HiSeq 3000 (1)
LTQ FT (1)
MaXis (1)

Publication Date

2013 (146)
2014 (113)
2012 (111)
2015 (98)
2016 (91)
2011 (91)
2010 (91)
2022 (65)
2025 (57)
2024 (52)
2021 (52)
2023 (48)
2009 (47)
2020 (46)
2026 (45)
2008 (44)
2019 (29)
2018 (17)
2007 (12)
2017 (11)
2006 (6)
2005 (2)
2004 (1)

UNIPROT ID/AC

3BHS1_MACMU (1)
89462.XP_006039585.1 (1)
89462.XP_006039600.1 (1)
89462.XP_006039626.1 (1)
89462.XP_006039630.1 (1)
89462.XP_006039638.1 (1)
89462.XP_006039640.1 (1)
89462.XP_006039668.1 (1)
89462.XP_006039674.1 (1)
89462.XP_006039692.1 (1)
89462.XP_006039695.1 (1)
89462.XP_006039696.1 (1)
89462.XP_006039697.1 (1)
89462.XP_006039706.1 (1)
89462.XP_006039712.1 (1)
89462.XP_006039721.1 (1)
89462.XP_006039726.1 (1)
89462.XP_006039730.1 (1)
89462.XP_006039752.1 (1)
89462.XP_006039756.1 (1)
89462.XP_006039757.1 (1)
89462.XP_006039762.1 (1)
89462.XP_006039763.1 (1)
89462.XP_006039783.1 (1)
89462.XP_006039794.1 (1)
89462.XP_006039815.1 (1)
89462.XP_006039816.1 (1)
89462.XP_006039820.1 (1)
89462.XP_006039846.1 (1)
89462.XP_006039847.1 (1)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:17368 (25)
CHEBI:16708 (23)
CHEBI:17596 (22)
CHEBI:16704 (21)
CHEBI:16919 (21)
CHEBI:30769 (21)
CHEBI:17568 (20)
CHEBI:15891 (20)
CHEBI:15756 (20)
CHEBI:16335 (19)
CHEBI:16737 (19)
CHEBI:17895 (19)
CHEBI:16359 (18)
CHEBI:16411 (18)
CHEBI:16027 (18)
CHEBI:17351 (18)
CHEBI:17154 (17)
CHEBI:16196 (17)
CHEBI:55328 (17)
CHEBI:15971 (17)
CHEBI:30915 (17)
CHEBI:15354 (17)
CHEBI:18257 (16)
CHEBI:16750 (16)
CHEBI:17748 (16)
CHEBI:17821 (16)
CHEBI:17203 (16)
CHEBI:15843 (16)
CHEBI:16015 (16)
CHEBI:17191 (16)

Metabolite Name

Inosine (19)
Adenosine (18)
Adenine (18)
Hypoxanthine (18)
Uracil (16)
Uric acid (15)
Creatine (15)
L-Tyrosine (15)
Guanosine (14)
Thymidine (14)
Creatinine (14)
Taurine (13)
Guanine (13)
Cytidine (13)
Xanthine (13)
Uridine (13)
L-Phenylalanine (13)
L-Tryptophan (12)
Azelaic acid (12)
L-Histidine (11)
Xanthosine (11)
Citric acid (11)
Dodecanedioic acid (11)
Thymine (10)
Pantothenic acid (10)
Arachidonic acid (10)
Oleamide (10)
Palmitic acid (10)
Oleic acid (10)
Dodecanoic acid (10)

Study type

Transcription profiling by array (481)
RNA-seq of coding RNA (148)
ChIP-seq (90)
RNA-seq of non coding RNA (36)
Methylation profiling by high throughput sequencing (22)
Comparative genomic hybridization by array (20)
Unknown experiment type (16)
Methylation profiling by array (13)
RNA-seq of coding RNA from single cells (11)
Other (10)
ChIP-chip by tiling array (7)
ChIP-chip by array (6)
Cell line - High-throughput sequencing (5)
DNA-seq (5)
Transcription profiling by tiling array (4)
Transcription profiling by RT-PCR (4)
Human - High-throughput sequencing (2)
Genotyping by array (2)
CUT&RUN (2)
Transcription profiling by SAGE (1)
MeDIP-seq (1)
MicroRNA profiling by high-throughput sequencing (1)
Animal - High-throughput sequencing (1)
RNAi profiling by array (1)
Spatial transcriptomics by high-throughput sequencing (1)
ATAC-seq (1)
Hi-C (1)
ScATAC-seq (1)
Single nucleus RNA sequencing (1)
MicroRNA profiling by array (1)

Release Date

2025 (1372)
2022 (1218)
2023 (1033)
2024 (1005)
2021 (892)
2020 (654)
2019 (405)
2018 (395)
2016 (346)
2017 (286)
2015 (280)
2014 (233)
2013 (231)
2026 (190)
2012 (168)
2011 (122)
2010 (121)
2009 (60)
2008 (52)
2007 (16)
2006 (10)
2005 (7)
2004 (1)
2003 (1)

Lab affiliation

College of Animal Sciences, Zhejiang University, Hangzhou, P. R. China (9)
1Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China. (2)
CAS Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China. (2)
Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical School (2)
Nanjing University (2)
School of Life Sciences, Xiamen University (2)
The First Affiliated Hospital of Zhejiang University School of Medicine (2)
The First Affiliated Hospital, School of Medicine, Zhejiang University (2)
UT Southwestern Medical Center (2)
West China Second University Hospital, Sichuan University (2)
1 Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China. 2 Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. 3 Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China 3.Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
Anhui Province Key Laboratory of Medical Physics and Technology, Institute of Health and Medical Technology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China University of Science and Technology of China, Hefei, Anhui 230026, P. R. China Hefei Cancer Hospital, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China Precision Medicine Research Laboratory of Anhui Province, Hefei, Anhui 230088, P. R. China (1)
Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing, China (1)
Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, China (1)
CAS Center for Excellence in Molecular Plant Science, Chinese Academic on Science (1)
CAS Key Laboratory of Separation Science for Analytical Chemistry, National Chromatographic R & A Center, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China. (1)
CAS Key Laboratory of Separation Science for Analytical Chemistry, National Chromatographic R & A Center, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, China. (1)
Cheeloo College of Medicine, Shandong University, Jinan 250002, PR.China. Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei 230001, China. (1)
Cheeloo College of Medicine, Shandong University, Jinan 250002, PR.China. Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei 230001, China. (1)
Cheeloo Medical College, Shandong University, Jinan, Shandong, China (1)
College of life sciences and technology,Guangxi University (1)
Dalian Institute of Chemical Physics, Chinese Academy of Sciences (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China (1)
Department of Biochemistry and Molecular Biology Bio21 Molecular Science and Biotechnology Institute Third floor, room 368 The University of Melbourne Victoria 3010 Australia (1)
Department of Biochemistry and Molecular Biology, Mitochondria lab, Monash University, Clayton 3800, Australia (1)
Department of Biochemistry and Pharmacology, The Bio21 Molecular Science & Biotechnology Institute, University of Melbourne, 30 Flemington Rd, Parkville Victoria 3052, Australia (1)

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L-serine enables reducing the virulence of Acinetobacter baumannii and modulating the SIRT1 pathway to eliminate the pathogen

The emergence of high-virulent Acinetobacter baumannii strains increases the mortality of patients and seriously affects their prognosis, which motivates us to explore novel ways to control such infections. In this study, gas chromatography-mass spectrometry was adopted to explore the me...

2024-01-18 | MTBLS8966 | MetaboLights

3C-seq of HT29 cells with CCAT1-L knockdown or scramble knockdown

CCAT1-L is a highly expressed long noncoding RNA located in the colorectal cancer specific super enhance region about 500 kb upstream of MYC gene. Knockdown of CCAT1-L significantly down-regulated interaction frequency between CCAT1 and MYC locus and repress MYC expression, suggesting a long-range c...

ORGANISM(S): Homo sapiens

2014-02-22 | E-GEOD-55261 | biostudies-arrayexpress

Changes in the Milk Metabolome of the Giant Panda (Ailuropoda melanoleuca) with Time after Birth – Three Phases in Early Lactation and Progressive Individual Differences

Ursids (bears) in general, and giant pandas in particular, are highly altricial at birth. The components of bear milks and their changes with time may be uniquely adapted to nourish relatively immature neonates, protect them from pathogens, and support the maturation of neonatal digestive physiology...

2015-03-31 | MTBLS165 | MetaboLights

Global metabolomics of fireflies (Coleoptera: Lampyridae) explore metabolic adaptation to fresh water in insects

Aquatic insects are well-adapted to freshwater environments, but metabolic mechanisms of such adaptations, particularly to primary environmental factors (e.g., hypoxia, water pressure, dark light and abundant microbes), are poorly known. Most firefly species (Coleoptera: Lampyridae) are terrestri...

2022-10-03 | MTBLS4987 | MetaboLights

Differential Analysis of Stress Tolerance and Transcriptome of Probiotic Lacticaseibacillus casei Zhang Produced from Solid-State (SSF-SW) and Liquid-State (LSF-MRS) Fermentations.

Not available

S-EPMC7716342 | biostudies-literature

Preparation and Characterization of an Ancient Aminopeptidase Obtained from Ancestral Sequence Reconstruction for L-Carnosine Synthesis.

Not available

S-EPMC9570944 | biostudies-literature

Impulse control deficits among patients with nonsuicidal self-injury: a mediation analysis based on structural imaging.

Not available

S-EPMC11882201 | biostudies-literature

The complete chloroplast genome sequence of Styrax chinensis Hu et S.Y. Liang (Styracaceae).

Not available