Zhang Michael M

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Unknown (481)
Genomics (195)
Transcriptomics (141)
Proteomics (86)
Metabolomics (25)
Multiomics (4)
Genomic (2)
Other (2)
Models (1)

Organisms

Homo sapiens (242)
Mus musculus (55)
Saccharomyces cerevisiae (7)
Escherichia coli (6)
Rattus norvegicus (5)
Zea mays (3)
Oryza sativa (3)
Drosophila melanogaster (2)
Methanosarcina acetivorans (1)
Caulobacter vibrioides (1)
Saccharomyces mikatae (1)
Escherichia coli CFT073 (1)
Macaca nemestrina (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S (1)
Tetraodon nigroviridis (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028s Wu (1)
Neurospora crassa (1)
Toxoplasma gondii (1)
Xenopus laevis (1)
Medicago truncatula (1)
Lotus japonicus (1)
Schizosaccharomyces pombe (1)
Ovis aries (1)
Escherichia coli K-12 (1)
Canis lupus familiaris (1)
Gallus gallus (1)
Sus scrofa (1)
Danio rerio (1)
Arabidopsis thaliana (1)
Capsella rubella (1)

Repository

biostudies-arrayexpress (183)
EGA (154)
MassIVE (40)
pride (35)
MetaboLights (21)
PanoramaPublic (5)
GNPS (4)
iProX (4)
jPOST (3)
dbGaP (2)
BioModels (1)
GPMDB (1)

Tissue

Cell culture (6)
Brain (3)
Lung (3)
Permanent cell line cell (3)
Cardiac muscle (2)
Epithelial cell (2)
Liver (2)
Blood plasma (1)
Bone (1)
Cartilage (1)
Ewing's sarcoma cell (1)
Heart (1)
Hepatocyte (1)
Osteoblast (1)
Photosynthetic cell (1)
Skeletal muscle (1)
Skin (1)

Disease

Not Available (1)
Alveolar soft part sarcoma (1)
Bone osteosarcoma (1)
Brain cancer (1)
Brain glioblastoma multiforme (1)
CADASIL (1)
Chronic obstructive pulmonary disease (1)
Disease free (1)
Lung cancer (1)
Myopathy (1)
Nemaline myopathy (1)
Non-small cell lung carcinoma (1)
Osteoarthritis (1)
Osteogenesis imperfecta (1)
Proteus syndrome (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (35)
Shotgun proteomics (18)
Mass spectrometry (16)
Illumina HiSeq 2000 (11)
Bottom-up proteomics (8)
Affinity purification coupled with mass spectrometry proteomics (6)
Illumina HiSeq 2500 (3)
NMR spectroscopy (3)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Mass spectrometry assay (2)
Data-dependent acquisition (2)
Data-independent acquisition (2)
Gel-based experiment (2)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Illumina HiSeq 2000, unknown (1)
Affymetrix_U133v2, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina Genome Analyzer IIx (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (11)
LTQ (9)
Orbitrap Fusion Lumos (8)
Q Exactive (5)
Liquid Chromatography MS - positive - reverse phase (5)
LTQ XL (4)
Q Exactive Plus (4)
Illumina HiSeq 2500 (3)
Illumina HiSeq 2000 (3)
Bruker maXis ESI Quadrupole TOF (2)
LTQ Orbitrap Velos (2)
Orbitrap Exploris 480 (2)
Orbitrap Fusion (2)
TimsTOF Pro (2)
418 [Affymetrix] (1)
GenePix 4000B [Axon Instruments] (1)
Illumina Genome Analyzer II (1)
Illumina HiSeq 3000 (1)
Illumina HiSeq 4000 (1)
LTQ FT (1)
MaXis (1)
Synapt XS (1)
Thermo Scientific TRACE 1310 GC-MS (1)
Instrument (1)
Exactive Plus (1)
Orbitrap Fusion ETD (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
TripleTOF 5600 (1)
Velos elite (1)

Publication Date

2012 (30)
2014 (29)
2013 (26)
2015 (25)
2022 (22)
2021 (19)
2011 (17)
2020 (16)
2023 (13)
2010 (12)
2019 (12)
2024 (11)
2017 (10)
2009 (9)
2007 (9)
2008 (8)
2025 (7)
2026 (5)
2016 (4)
2018 (4)
2005 (2)
2006 (1)

CHEBI ID

CHEBI:16449 (6)
CHEBI:16708 (5)
CHEBI:15741 (5)
CHEBI:26986 (4)
CHEBI:17234 (4)
CHEBI:25017 (4)
CHEBI:27266 (4)
CHEBI:18132 (4)
CHEBI:16010 (4)
CHEBI:7916 (4)
CHEBI:15428 (4)
CHEBI:14314 (4)
CHEBI:16027 (4)
CHEBI:16919 (4)
CHEBI:18186 (3)
CHEBI:28300 (3)
CHEBI:24898 (3)
CHEBI:30794 (3)
CHEBI:30746 (3)
CHEBI:40992 (3)
CHEBI:17306 (3)
CHEBI:29016 (3)
CHEBI:16704 (3)
CHEBI:6650 (3)
CHEBI:17148 (3)
CHEBI:28867 (3)
CHEBI:64349 (3)
CHEBI:17311 (3)
CHEBI:16856 (3)
CHEBI:17568 (3)

Metabolite Name

LPC 13:0|LPC 13:0|LPC 13:0|LPC 13:0|LPC 13:0 (3)
LPE 18:0|LPE 18:0|LPE 18:0|LPE 18:0|LPE 18:0 (3)
PC 18:0/18:2|PC 18:0/18:2|PC 18:0/18:2|PC 18:0/18:2|PC 18:0/18:2 (3)
PC 14:0/18:0|PC 14:0/18:0|PC 14:0/18:0|PC 14:0/18:0|PC 14:0/18:0 (3)
PG 18:0/18:2|PG 18:0/18:2|PG 18:0/18:2|PG 18:0/18:2|PG 18:0/18:2 (3)
Maltose (3)
Threonine (3)
Glucose (3)
Alanine (3)
Valine (3)
Leucine (3)
Succinate (3)
PI 21:0/22:6|PI 21:0/22:6|PI 21:0/22:6|PI 21:0/22:6|PI 21:0/22:6 (2)
PI 17:0/20:4|PI 17:0/20:4|PI 17:0/20:4|PI 17:0/20:4|PI 17:0/20:4 (2)
PI 17:0/14:1|PI 17:0/14:1|PI 17:0/14:1|PI 17:0/14:1|PI 17:0/14:1 (2)
PI 12:0/13:0|PI 12:0/13:0|PI 12:0/13:0|PI 12:0/13:0|PI 12:0/13:0 (2)
SM 24:1|SM 24:1|SM 24:1|SM 24:1|SM 24:1 (2)
SM 24:0|SM 24:0|SM 24:0|SM 24:0|SM 24:0 (2)
SM 18:1|SM 18:1|SM 18:1|SM 18:1|SM 18:1 (2)
SM 18:0|SM 18:0|SM 18:0|SM 18:0|SM 18:0 (2)
LPC 18:1|LPC 18:1|LPC 18:1|LPC 18:1|LPC 18:1 (2)
LPC 18:0|LPC 18:0|LPC 18:0|LPC 18:0|LPC 18:0 (2)
LPC 16:0|LPC 16:0|LPC 16:0|LPC 16:0|LPC 16:0 (2)
LPC 14:0|LPC 14:0|LPC 14:0|LPC 14:0|LPC 14:0 (2)
LPE 18:1|LPE 18:1|LPE 18:1|LPE 18:1|LPE 18:1 (2)
LPE 14:0|LPE 14:0|LPE 14:0|LPE 14:0|LPE 14:0 (2)
PS 16:0/16:0|PS 16:0/16:0|PS 16:0/16:0|PS 16:0/16:0|PS 16:0/16:0 (2)
Cer 20:0|Cer 20:0|Cer 20:0|Cer 20:0|Cer 20:0 (2)
Cer 18:1|Cer 18:1|Cer 18:1|Cer 18:1|Cer 18:1 (2)
Cer 18:0|Cer 18:0|Cer 18:0|Cer 18:0|Cer 18:0 (2)

IsPrivate

False (1)

Submitter Keywords

Machine Learning Model (1)

Modelling Approach

Other (1)

Study type

Transcription profiling by array (80)
ChIP-seq (39)
RNA-seq of coding RNA (26)
Unknown experiment type (7)
ChIP-chip by tiling array (6)
Comparative genomic hybridization by array (4)
RNA-seq of non coding RNA (4)
ATAC-seq (3)
Other (3)
Methylation profiling by high throughput sequencing (2)
RNA-seq of non coding RNA from single cells (1)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
MicroRNA profiling by high throughput sequencing (1)
ScATAC-seq (1)
MicroRNA profiling by array (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2024 (59)
2021 (58)
2023 (53)
2025 (48)
2014 (44)
2015 (42)
2022 (41)
2018 (40)
2016 (35)
2019 (35)
2012 (34)
2013 (32)
2017 (31)
2020 (30)
2011 (20)
2010 (17)
2009 (11)
2008 (11)
2007 (10)
2026 (7)
2005 (3)
2006 (1)
2003 (1)
2000 (1)

Lab affiliation

Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver V5Z 1L3, Canada (2)
University of Copenhagen Department of Biomedical Sciences Blegdamsvej 3B København N, DK-2200 (2)
Associate Professor of Biochemistry Associate Professor of Cell Biology Duke University School of Medicine (1)
California State University Long Beach (1)
Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver V5Z 1L3, Canada. (1)
Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton, VIC 3800, Australia. EMBL-Australia and the ARC Centre of Excellence in Advanced Molecular Imaging, Clayton, Australia. (1)
Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Faculty of Medicine, Nursing and Health Sciences, Monash University; Clayton, Victoria, 3800, Australia (1)
Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Faculty of Medicine, Nursing and Health Sciences, Monash University; Clayton, Victoria, 3800, Australia. (1)
Department of Biological Engineering, Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, USA (1)
Department of Orthopaedics and Traumatology, The University of Hong Kong-Shenzhen Hospital, Shenzhen, China (1)
Department of Phamaceutical Sciences Wayne State University (1)
Departments of Neurology, University of Michigan, Ann Arbor, MI 48109-5622, USA. Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI 48109-5622, USA Neurology Service, VA Ann Arbor Healthcare System, Ann Arbor, MI 48105, USA (1)
Institute for Diabetes and Endocrinology (IDE) Helmholtz Zentrum München Ingolstaedter Landstr. 1 85764 Neuherberg, Germany (1)
Institute for Systems Biology (1)
Institute of Sports Medicine Copenhagen, Bispebjerg Hospital, and Center for Healthy Aging, University of Copenhagen, Copenhagen, Denmark. (1)
Mass Spectrometry and Proteomics Facility, Campus Chemistry Instrument Center, The Ohio State University, Columbus, Ohio, USA The Ohio State University Wexner Medical Center, Columbus, Ohio, USA (1)
Medical College of Wisconsin (1)
Michael Smith Laboratories, Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, BC, Canada (1)
Monash Biomedicine Discovery Institute, Department of Microbiology, Monash University, Australia (1)
Neurosurgeon & Senior Scientist Developmental and Stem Cell Biology, The Hospital for Sick Children, Canada (1)
Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kgs. Lyngby, Denmark (1)
Novo Nordisk Foundation Center for Protein Research, University of Copenhagen (1)
Professor of Human Molecular Metabolism, dr.med. (MD, Doctor of Medical Science), Chief Research Physician, Specialist in Endocrinology, Herlev-Gentofte University Hospital, Department of Clinical Medicine, and Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Science, University of Copenhagen, Copenhagen, Denmark (1)
Professor, Department of Chemistry, Duke University, Lab Head: Fitzgerald Lab (1)
Professor, Department of Molecular Genetics, University of Toronto, Canada Scientific Director, SPARC BioCentre, Hospital for Sick Children (Sickkids), Toronto, Canada (1)
Program in Cell Biology Hospital For Sick Children, Toronto, SPARC BioCentre Hospital For Sick Children, Toronto, 8Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada (1)
Program in Cell Biology, SPARC BioCentre, Hospital For Sick Children, Toronto; Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada. (1)
Science for Life Laboratory, School of Biotechnology, KTH – Royal Institute of Technology, Stockholm, Sweden. (1)
Stanford University (1)
The Hospital for Sick Children (1)

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Dental Restorative Materials Based on Thiol-Michael Photopolymerization.

Not available

S-EPMC5958372 | biostudies-literature

Visible-Light-Initiated Thiol-Michael Addition Polymerizations with Coumarin-Based Photobase Generators: Another Photoclick Reaction Strategy.

Not available

S-EPMC5176105 | biostudies-literature

Selectively triggered: ROS-activated Michael acceptor prodrug strategy to enhance tumor targeting efficacy.

Not available

S-EPMC12319579 | biostudies-literature

NEIGHBOR Consortium Glaucoma GWAS

This is a case-control study of primary open angle glaucoma (POAG). POAG is an intraocular pressure (IOP) related progressive optic neuropathy that ultimately leads to blindness. For this study we have formed a collaborative consortium contributing 2170 POAG cases and 2347 controls with a unified...

phs000238 | dbGaP

Assessment of TEMPO as a Thermally Activatable Base Generator and Its Use in Initiation of Thermally-Triggered Thiol-Michael Addition Polymerizations.

Not available

S-EPMC6366629 | biostudies-literature

Asymmetric Synthesis of Substituted Thiolanes through Domino Thia-Michael-Henry Dynamic Covalent Systemic Resolution using Lipase Catalysis.

Not available

S-EPMC4498465 | biostudies-literature

Mechanistic Kinetic Modeling of Thiol-Michael Addition Photopolymerizations via Photocaged "Superbase" Generators: An Analytical Approach.

Not available

S-EPMC5630186 | biostudies-literature

Glaucoma Exome Sequencing

This is a study of primary open angle glaucoma (POAG) conducted through exome sequencing of cases and comparison of variant frequencies with general population frequencies available in dbGAP and controlled for sequencing platform artifact to minimize false positives.

POAG is an intraocular...

phs000558 | dbGaP

Transcriptional reprogramming of tumor-associated endothelial cells by disruption of TNF-M-NM-1 signaling

Endothelial inflammation contributes to the pathogenesis of numerous human diseases; however, the role of tumor endothelial inflammation in the growth of experimental tumors and its influence on the prognosis of human cancers is less understood. TNF-M-NM-1, an important mediator of tumor stromal inf...

ORGANISM(S): Mus musculus

2012-10-20 | E-GEOD-33253 | biostudies-arrayexpress

ba3dbe29-0fd7-4ee5-99b8-d69d3c381e6e - samples

The BAM files for WES and RNA seq used in the article "Molecular Profiling Reveals Unique Immune and Metabolic Features of Melanoma Brain Metastases." on cancer Discovery 2019. PMID: 30787016 PMCID: PMC6497554. Authors : Grant M Fischer, ..., Michael A Davies.

EGAD00001005046 | EGA

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934 Results

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