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MetabolomicsNormalization strategies for lipidome data in cell line panels & Distinct lipidomic profiles in breast cancer cell lines relate to proliferation and EMT phenotypes

Sample collection can significantly affect measurements of relative lipid concentrations in cell line panels, hiding intrinsic biological properties of interest between cell lines. Most quality control steps in lipidomic data analysis focus on controlling technical variation. Correcting for the t...

2025-08-07 | MTBLS9493 | MetaboLights
UnknownA decade of progress: bibliometric analysis of trends and hotspots in oral microbiome research (2013-2022).
Not available
S-EPMC10213461 | biostudies-literature
TranscriptomicsIntestinal expression in murine antibiotic-induced acceleration of Type 1 diabetes
Here we asked whether the single early-life (pup day of life P5-P10) antibiotic pulse was sufficient to enhance Type-1 Diabetes (T1D) in Non Obese Diabetic (NOD) mice. Two sets of experimental samples were analyzed for changes in intestinal pathway expression using the NOD mouse model and Pulsed Ant...
ORGANISM(S): Mus musculus 
2018-08-19 | E-MTAB-6826 | biostudies-arrayexpress
MetabolomicsTranscriptomic and Metabolomics Profiling of Phage–Host Interactions between Phage PaP1 and Pseudomonas aeruginosa
The basic biology of bacteriophage–host interactions has attracted increasing attention due to a renewed interest in the therapeutic potential of bacteriophages. In addition, knowledge of the host pathways inhibited by phage may provide clues to novel drug targets. However, the effect of phage on ba...
2018-05-03 | MTBLS431 | MetaboLights
ProteomicsPlasma proteomics analysis of adolescent idiopathic scoliosis patients revealed by Quadrupole-Orbitrap Mass Spectrometry
We aim to investigate the changes of plasma proteome among mild, severe AIS patients and healthy controls.
ORGANISM(S): Homo Sapiens 
2021-02-18 | PXD024246 |
ProteomicsSPD1590_iTRAQ - A Novel Iron Transporter SPD_1590 in Streptococcus pneumoniae Contributing to Bacterial Virulence Properties
Streptococcus pneumoniae has three main transporters for iron acquisition: PiaABC, PiuABC, and PitABC. Our previous study had shown that the mRNA and protein levels of SPD_1590 are significantly upregulated in a piuA/piaA/pitA triple mutant, suggesting that SPD_1590 might be a novel iron transporter...
ORGANISM(S): Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) 
2018-08-08 | PXD008814 | Pride
Streptococcus pneumoniae d39 Itraq labeling Orbitrap fusion lumos 
ProteomicsPotential Role of Lysine Acetylation in Antibiotic Resistance of Escherichia coli
Antibiotic resistance is increasingly becoming a serious challenge to public health. The regulation of metabolism by post-translational modifications (PTMs) has been widely studied; however, the comprehensive mechanism underlying the regulation of acetylation in bacterial resistance against antibiot...
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2022-10-14 | PXD030283 | Pride
Post-translational modification  escherichia coli  acetylation  pykf  antibiotic resistance 
Unknown326K at E Protein Is Critical for Mammalian Adaption of TMUV.
Not available
S-EPMC10747068 | biostudies-literature
ProteomicsPhysical and chemical niche of human growth plate for polarized bone development
The significantly enriched proteins in growth plate-epiphysis interface compared to growth plate and epiphysis and the significantly enriched proteins in growth plate-metaphysis interface compared to growth plate and metaphysis;
ORGANISM(S): Homo Sapiens 
2025-01-16 | PXD059908 |
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