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Transcriptomics16S rRNA gene sequence analysis of feces samples from rats treated with paclitaxel or vehicle controls
To address the role of gut microbiota in the development of paclitaxel-induced peripheral neuropathy (PIPN), we performed 16S rRNA sequencing analysis of feces samples at 14 days and 28 days after the initiation of paclitaxel or vehicle injections.
ORGANISM(S): Rattus norvegicus 
2023-10-16 | E-MTAB-13426 | biostudies-arrayexpress
TranscriptomicsRNA-Seq of rat dorsal root ganglions treated with paclitaxel against untreated controls
L4-L5 segment dorsal root ganglion (DRG) samples from controls and the paclitaxel-induced peripheral neuropathy (PIPN) rats were collected at day 14 after the initiation of paclitaxel treatment. Paclitaxel and vehicle were administered intraperitoneally at 2 mg/kg for four consecutive days at a fina...
ORGANISM(S): Rattus norvegicus 
2023-10-16 | E-MTAB-13430 | biostudies-arrayexpress
UnknownNew disease-resistant, seedless grapes are developed using embryo rescue and molecular markers.
Not available
S-EPMC6879691 | biostudies-literature
MetabolomicsTFAM loss induces nuclear actin assembly upon mDia2 malonylation to promote liver cancer metastasis
The mechanisms underlying cancer metastasis remain poorly understood. Here, we report that TFAM deficiency rapidly and stably induced spontaneous lung metastasis in mice with liver cancer. Interestingly, unexpected polymerization of nuclear actin was observed in TFAM-knockdown HCC cells when cytoske...
2022-06-23 | MTBLS4307 | MetaboLights
MetabolomicsSupplementation of Bacillus sp. DU-106 reduces hypercholesterolemia and ameliorates gut dysbiosis in high-fat diet rats

Gut microbiota modulation by a probiotic is a novel therapy for hypercholesterolemia mitigation. This study initially investigated the potential hypocholesterolemic effect of Bacillus sp. DU-106 in hypercholesterolemic rats and explored its potential relation with gut microbiota. Sprague-Dawley r...

2021-04-08 | MTBLS1168 | MetaboLights
ProteomicsiTRAQ-based quantitative proteomic profiling of Natranaerobius thermophilus in response to salinity stress
Natranaerobius thermophilus is a unique extremophilic microorganism that exhibits remarkable adaptability and selectivity to the complex extreme environment characterized by high salt, high alkalinity, high temperature, and anaerobic conditions. However, the regulatory mechanisms of genes and protei...
ORGANISM(S): Natranaerobius Thermophilus Jw/nm-wn-lf 
2024-01-27 | PXD042033 |
MetabolomicsParabacteroides distasonis ameliorates insulin resistance via activation of intestinal GPR109a
Gut microbiota plays a key role in insulin resistance (IR). Here we perform a case-control study of Chinese adults (ChiCTR2200065715) and identify that Parabacteroides distasonis is inversely correlated with IR. Treatment with P. distasonis improves IR, strengthens intestinal integrity, and reduces ...
2023-11-01 | MTBLS7943 | MetaboLights
ProteomicsHuman HNF1A KI mice liver proteome analysis
Nonalcoholic fatty liver disease (NAFLD) is a pathological condition caused by excessive fat accumulation in liver. HNF1A is the pathogenic cause of hepatocellular adenoma and HCC. It is an important transcription factor in liver. We constructed a knock-in mice expressing a human dominant negative H...
ORGANISM(S): Mus Musculus 
2023-03-02 | PXD040561 |
TranscriptomicsA comprehensive study to understand the effects of climate warming, simulated by soil transplant, on soil microbial community and its feedback responses
Soil transplant serves as a proxy to simulate climate change in realistic climate regimes. Here, we assessed the effects of climate warming and cooling on soil microbial communities, which are key drivers in EarthM-bM-^@M-^Ys biogeochemical cycles, four years after soil transplant over large transec...
ORGANISM(S): uncultured bacterium 
2013-10-30 | E-GEOD-51592 | biostudies-arrayexpress
ProteomicsThe changes in lysine acetylation levels of Bacillus altitudinis 6ww6 under salt stress
Applied the quantitative acetylome analysis technique to identify the up-regulated and down-regulated acetylation sites of proteins from Bacillus altitudinis under salt stress, and found that differentially acetylated proteins under salt stress mainly focused on energy generation and conversion, ami...
ORGANISM(S): Bacillus Altitudinis 
2024-09-25 | PXD056209 |
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