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TranscriptomicsFunctional Annotation of the Bovine Genome
The goal of the proposed project is to generate high-quality detailed transcript and chromatin status datasets from a comprehensive set of bovine tissues, developmental stages, and cells through a set of rationally selected assays. Experimental data generated by the project have been analyzed using ...
ORGANISM(S): Bos taurus 
2022-10-13 | E-MTAB-12052 | biostudies-arrayexpress
MetabolomicsImaginal disc growth factor maintains cuticle structure and controls melanization in the spot pattern formation of Bombyx mori

The complex stripes and patterns of insects play key roles in behavior and ecology. However, the fine-scale regulation mechanisms underlying pigment formation and morphological divergence remain largely unelucidated. Here we demonstrated that imaginal disc growth factor (IDGF) maintains cuticle s...

2020-09-20 | MTBLS1825 | MetaboLights
TranscriptomicsWhole transcriptome target sequencing: profiling gene expression and alternative polyadenylation with one pipeline.
We have developed a deep sequencing method called Whole Transcriptome Target Sequencing (WTTS), which sequences the 3’ ends of polyA+ RNA. This method can simultaneously profile gene expression and alternative polyadenylation. A pooled total RNA sample derived from three male and three female adul...
ORGANISM(S): Xenopus tropicalis 
2016-07-22 | E-GEOD-74919 | biostudies-arrayexpress
ProteomicsProteomics and phosphoproteomics reveal immune and detoxification-related functions of cystatin vaccines against adult ticks Haemaphysalis doenitzi ovary
Proteomics and phosphoproteomics reveal immune and detoxification-related functions of cystatin vaccines against adult ticks Haemaphysalis doenitzi ovary
ORGANISM(S): Haemaphysalis Doenitzi 
2024-08-28 | PXD055423 |
Proteomicsthe proteomics of IGFBP6 in endothelial cells (HUVECs)
To unravel the direct mechanism of the anti-inflammatory effects of IGFBP6 in ECs, we analysed HUVECs treated with either adenovirus-Flag-IGFBP6 (Ad-IGFBP6) or control adenovirus (Ad-NC). We precipitated IGFBP6 from overexpressed ECs followed by mass spectrometry.
ORGANISM(S): Homo Sapiens 
2024-05-13 | PXD052204 |
TranscriptomicsSMN2 splicing modifiers improve motor function and longevity in mice with spinal muscular atrophy
Characterization of the selectivity of SMN splicing modifiers in SMA type I fibroblasts by RNASeq In total 12 samples were analyzed, divided into four distinct groups (treated with SMN-C3 @ 500 nM; controls for SMN-C3; treated with SMN-C1 @ 100 nM; controls for SMN-C1) containing 3 replicates each.
ORGANISM(S): Homo sapiens 
2014-10-22 | E-GEOD-62540 | biostudies-arrayexpress
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