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ProteomicsSWATH-MS analysis of 3-hydroxy-3-methylglutaryl-CoA synthase specific inhibitor (F-244)-treated Arabidopsis
3-Hydroxy-3-methylglutaryl-CoA synthase (HMGS) is the second enzyme in the mevalonate pathway. F-244 is the specific inhibitor of HMGS. F-244 treatment caused reduced primary root growth. SWATH-MS quantitative proteomics analysis was carried out to identify differential expressed proteins in F-244-t...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-10-01 | PXD009776 | Pride
Arabidopsis thaliana F-244 Proteomics Swath Hmgs 
TranscriptomicsGenome Sequencing and Comparative Transcriptomics of Race1 and Race4 of Banana pathogen: Fusarium oxysporum f.sp. Cubense
Deep sequencing of mRNA from Fusarium oxysporum f. sp. Cubense 1 and 4 after infecting Musa acuminata 0h and 48h. Analysis of ploy(A)+ RNA of different hours after infecting of Musa acuminata
ORGANISM(S): Fusarium oxysporum f. cubense 
2014-08-27 | E-GEOD-40581 | biostudies-arrayexpress
ProteomicsIdentification of the cellular component interacted with F. nucleatum.
We incubated F. nucleatum lysates with biotinylated proteins from KRAS p.G12D, KRAS p.G13D and KRAS WT cells respectively. Subsequent western blot analysis showed that three candidate proteins from F. nucleatum might interact with KRAS p.G12D cells. The bands of interest were then submitted for mass...
ORGANISM(S): Fusobacterium nucleatum CTI-1 
2024-01-25 | PXD048686 | Pride
Kras g12d fn1859 
ProteomicsFrancisella tularensis virulence is dependent on a conserved putative catalytic triad within the Type VI secretion system component PdpC
Many Gram-negative bacteria utilize the ubiquitous and versatile type VI secretion systems (T6SS) for diverse purposes, such as outcompeting other microbes or to successfully colonize hosts. T6SS of common pathogens are classified as T6SSi, but an outlier is the T6SSii and it is present only in the ...
ORGANISM(S): Francisella tularensis subsp. novicida (strain U112) 
2026-03-09 | PXD059583 | Pride
Virulence Type vi secretion system Amino acid triad Francisella tularensis Pdpc 
ProteomicsThe Periodontal Pathogen Fusobacterium nucleatum Exacerbates Alzheimer’s Pathogenesis via Specific Pathways
Alzheimer’s disease (AD) is the most common form of dementia in older adults and has a devastating impact on the patient’s quality of life, which creates a significant socio-economic burden for the affected individuals and their families. In recent years, studies have identified a relationship betwe...
ORGANISM(S): Mus musculus (Mouse) 
2022-08-12 | PXD033147 | Pride
F. nucleatum Mouse model Alzheimer’s disease Inflammation Periodontitis 
UnknownGlobal profiling of alternative splicing events and gene expression regulated by hnRNPH/F.
Not available
S-EPMC3524136 | biostudies-literature
ProteomicsThe F-box protein SLOW MOTION regulates hypocotyl growth in Arabidopsis
Here, in a time-course phosphoproteome analysis on Arabidopsis seedlings exposed to control or high ambient temperature, we observed reduced levels of diverse proteins over time, which could be in part due to transcription, translation and/or degradation. In addition, we observed differential phosph...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2025-05-26 | PXD035922 | Pride
Arabidopsis thaliana Proteome Phosphoproteome Temperature 
UnknownIdentification of three novel mite allergens, Der f 42, Der f 43, and Der f 44, from <i>Dermatophagoides farinae</i> by gelsolin interactome analysis.
Not available
S-EPMC12158493 | biostudies-literature
UnknownCharacterizing IgG4-related disease with ¹⁸F-FDG PET/CT: a prospective cohort study.
Not available
S-EPMC4089015 | biostudies-literature
UnknownEffects of mycotoxin-producing fungi on the fitness and gut bacterial community of the soil springtail Folsomia candida.
Not available
S-EPMC11537059 | biostudies-literature
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