Zhu Jin J - OmicsDI

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Unknown (2889)
Proteomics (84)
Metabolomics (12)
Transcriptomics (9)
Genomics (9)
Multiomics (4)

Organisms

Chlamydomonas reinhardtii (50)
Pseudomonas canadensis (50)
Marchantia polymorpha subsp. ruderalis (50)
Methylocystis sp. (50)
Exiguobacterium sp. SH31 (50)
Porites pukoensis (50)
Bothrops insularis (50)
Bothrops jararaca (50)
Bothrops jararacussu (50)
Bothrops cotiara (50)
Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 (50)
Dinosauria (50)
Trypanosoma vivax Y486 (50)
Streptomyces coelicolor (50)
Pseudomonas taiwanensis (50)
Burkholderia ubonensis MSMB22 (50)
Pseudomonas aeruginosa PA103 (50)
Artibeus jamaicensis (50)
Homo sapiens (28)
Mus musculus (9)
Zea mays (2)
Arabidopsis thaliana (2)
Shigella flexneri (1)
Oryza sativa (1)
Sus scrofa (1)
Tetrahymena thermophila SB210 (1)
Aeromonas hydrophila subsp. hydrophila AL09-71 (1)
Spinacia oleracea (1)
Rattus norvegicus (1)
Oryctolagus cuniculus (1)

Repository

pride (50)
iProX (27)
biostudies-arrayexpress (13)
MetaboLights (12)
EGA (5)
MassIVE (3)
PeptideAtlas (3)
PAXDB (1)

Tissue

Cell culture (15)
Plant cell (4)
Liver (4)
Others (3)
Blood serum (3)
Shoot (2)
Flower (2)
Blood cell (2)
Embryo (2)
Epithelial cell (2)
Leaf (2)
Macrophage (2)
Hepatocyte (2)
Short term hematopoietic stem cell (1)
Tachyzoite (1)
Thallus (1)
Haploid cell (1)
Pancreatic ductal cell (1)
Prostate gland epithelium (1)
Melanocyte (1)
Prostate cancer cell line (1)
Oocyte (1)
Cerebrospinal fluid (1)
Flower bud (1)
Stem cell (1)
Stomach (1)
Lung (1)
Pancreas (1)
Heart (1)
Brain (1)

Disease

Pancreatic cancer (3)
Disease free (3)
Stomach disease (1)
Inflammation (1)
Severe acute respiratory syndrome (1)
Metabolic dysfunction-associated steatotic liver disease (1)
Acute leukemia (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (50)
Shotgun proteomics (25)
Bottom-up proteomics (10)
Mass spectrometry (9)
Data-dependent acquisition (6)
Gel-based experiment (4)
Top-down proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (3)
SWATH MS (3)
NMR spectroscopy (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (3)
Gas Chromatography MS - positive (2)
LTQ Orbitrap Elite (2)
SolariX (1)
TimsTOF Pro (1)
Q Exactive (1)
Orbitrap Eclipse (1)
Xevo G2-XS QTOF (Waters) (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Bruker (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
QExactive (1)
ThermoFinnigan LCQ Deca XP (1)
ThermoFinnigan LTQ (1)

Publication Date

2022 (20)
2021 (15)
2025 (11)
2024 (10)
2026 (8)
2015 (6)
2017 (6)
2014 (5)
2012 (4)
2023 (3)
2020 (2)
2018 (2)
2016 (2)
2011 (1)
2010 (1)
2008 (1)
2019 (1)
2007 (1)

UNIPROT ID/AC

A0A078FU03_BRANA (1)
A0A078HV77_BRANA (1)
A0A078HJW2_BRANA (1)
A0A078F3D4_BRANA (1)
A0A078J602_BRANA (1)
A0A078JZW8_BRANA (1)
A0A078JTX0_BRANA (1)
A0A078III4_BRANA (1)
A0A078GPJ0_BRANA (1)
A0A078GXK7_BRANA (1)
A0A078HWX6_BRANA (1)
A0A078GQZ5_BRANA (1)
A0A078HQH4_BRANA (1)
A0A078G765_BRANA (1)
A0A078HHU3_BRANA (1)
A0A078GA61_BRANA (1)
A0A078IYH6_BRANA (1)
A0A078IP03_BRANA (1)
A0A078JZ28_BRANA (1)
A0A078J7J8_BRANA (1)
A0A078I240_BRANA (1)
A0A078GRV4_BRANA (1)
A0A078HUL6_BRANA (1)
A0A078GLP5_BRANA (1)
A0A078GXU8_BRANA (1)
A0A078GHB2_BRANA (1)
A0A078IJE1_BRANA (1)
A0A078GAQ0_BRANA (1)
A0A078FP04_BRANA (1)
A0A078INI1_BRANA (1)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000247315 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:15428 (5)
CHEBI:30769 (5)
CHEBI:18012 (5)
CHEBI:15741 (5)
CHEBI:17596 (5)
CHEBI:26271 (4)
CHEBI:16449 (4)
CHEBI:18186 (4)
CHEBI:27266 (4)
CHEBI:25017 (4)
CHEBI:17568 (4)
CHEBI:16704 (4)
CHEBI:16335 (4)
CHEBI:17351 (4)
CHEBI:16995 (4)
CHEBI:16015 (4)
CHEBI:15891 (4)
CHEBI:32816 (4)
CHEBI:16196 (4)
CHEBI:16958 (4)
CHEBI:26984 (3)
CHEBI:22660 (3)
CHEBI:22653 (3)
CHEBI:15366 (3)
CHEBI:26986 (3)
CHEBI:24898 (3)
CHEBI:28044 (3)
CHEBI:16811 (3)
CHEBI:17189 (3)
CHEBI:16168 (3)

Metabolite Name

Fumaric acid (3)
L-lysine (3)
Leucine (3)
Glycine (3)
L-proline (3)
L-histidine (3)
Valine (3)
Succinic acid (3)
Proline (3)
L-methionine (3)
Isoleucine (3)
Inosine (3)
D-sphingosine (2)
N-acetyl-D-tryptophan (2)
L-norleucine (2)
Cholate (2)
Caprylic acid (2)
2-hydroxypyridine (2)
Palmitoleic acid (2)
4-hydroxyphenylacetic acid (2)
Linoleic acid (2)
Heptadecanoic acid (2)
L-cysteine (2)
Monoolein (2)
L-homoserine (2)
Ethanolamine (2)
Fisetin (2)
Tagatose (2)
Ribulose-5-phosphate (2)
Palmitic acid (2)

Modification

6x(2)H labeled dimethylated L-arginine (1)

Study type

RNA-seq of coding RNA (5)
Transcription profiling by array (3)
Methylation profiling by high throughput sequencing (3)
ChIP-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (458)
2022 (415)
2024 (373)
2023 (359)
2021 (301)
2020 (215)
2019 (127)
2017 (114)
2018 (109)
2016 (92)
2015 (86)
2026 (69)
2014 (66)
2013 (34)
2012 (26)
2011 (23)
2010 (12)
2008 (6)
2007 (5)
2005 (4)
2009 (3)
2004 (2)
2006 (1)
2002 (1)
2001 (1)

Lab affiliation

University at buffalo, SUNY (3)
Mayo Clinic, Department of Oncology (2)
Abbvie Bioresearch Center (2)
Key Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Ministry of Agriculture, Department of Horticulture, Zhejiang University, Hangzhou 310058, China (1)
School of Chinese Integrative Medicine,Hebei Medical University,Shijiazhuang,China (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Department of Pharmaceutical Sciences, University at Buffalo, Buffalo, New York, United States (1)
Institute of Systems Biomedicine, Department of Pathology, School of Basic Medical Sciences, Beijing Key Laboratory of Tumor Systems Biology, Peking-Tsinghua Center of Life Sciences, Peking University Health Science Center, Beijing 100191, China. (1)
Life Sciences Institute, Zhejiang University (1)
Key Laboratory of Separation Sciences for Analytical Chemistry, National Chromatographic R&A Center, Dalian Institute of Chemical Physics, Chinese Academy of Sciences (CAS), Dalian 116023, Liaoning, P. R. China. (1)
School of Pharmacy, Lanzhou University, Lanzhou, China (1)
Key Laboratory for Metabolic Diseases in Chinese Medicine, Nanjing University of Chinese Medicine (1)
Shanghai Veterinary Research Institute, Chinese Academy of Agriculture Sciences, Shanghai, China (1)
Lineberger Comprehensive Cancer Center, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA Department of Biochemistry and Biophysics, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
College of Animal Science and Veterinary Medicine, Huazhong Agricultural University, Wuhan, China (1)
Department of Pathology (1)
Department of Pharmaceutical Sciences, School of Pharmacy, University at Buffalo, Buffalo, New York, United States (1)
1. Institute of Comparative Medicine, College of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China 2. Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University, Yangzhou 225009, China (1)
Xiangya Hospital, Central South University (1)
Yu Faxiang Laboratory, Institute of Biomedical Sciences, Fudan University, Shanghai, China (1)
Bengbu Medical University (1)
Research Center for Blood Engineering and Manufacturing, Cyrus Tang Medical Institute, National Clinical Research Center for Hematologic Diseases, Collaborative Innovation Center of Hematology, Jiangsu Institute of Hematology, Institute of Blood and Marrow Transplantation, The First Affiliated Hospital of Soochow University, State Key Laboratory of Radiation Medicine and Protection, Soochow University, Suzhou, China. (1)
Beijing Tongren Hospital, Capital Medical University (1)
1.College of Veterinary Medicine, College of Animal Science, Jilin University, Changchun, 130062, China. 2. Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, 130122, China. (1)
Beijing proteome research center, Beijing, China (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing 211166, China (1)
Professor and Deputy Director, Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), University Road, Deralakatte, Mangalore 575018, India (1)
State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Animal Science and Technology, Guangxi University, Nanning, P.R. China (1)
Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, and Jilin University (1)
Institute of Systems Biomedicine Peking University Health Science Center Beijing 100191, P.R. China (1)

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Complete Genome Sequence of Glutamicibacter mysorens NBNZ-009, Isolated from Jin Lake Sediment.

Not available

S-EPMC9584331 | biostudies-literature

The IDI1/SREBP2 axis drives intrahepatic cholestasis and is a treatment target of San-Huang-Cai-Zhu formula identified by sequencing and experiments.

Not available

S-EPMC9944032 | biostudies-literature

Complete chloroplast genome of Impatiens huangyanensis Jin and Ding 2002: genomic features and phylogenetic relationship within genus Impatiens (Balsaminaceae).

Not available

S-EPMC10653657 | biostudies-literature

Metabolomic analysis of anti-hypoxia and anti-anxiety effects of Fu Fang Jin Jing Oral Liquid.

Not available

S-EPMC3799728 | biostudies-literature

Variations of Metabolites and Proteome from Lonicera japonica Thunb. Buds Blossom to Flowers under UV Radiation

Lonicera japonica Thunb., known as Jin Yin Hua or Japanese honeysuckle, is an herbal medicine in Asian countries. Its flowers have been used as folk medicine for clinical practice or used as food or making healthy beverage for 1500 years in China. To investigate the molecular developmental processes...

ORGANISM(S): Lonicera japonica

2017-01-18 | PXD005324 | Pride