Zhu Pan P - OmicsDI

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Unknown (1637)
Proteomics (58)
Transcriptomics (34)
Metabolomics (32)
Genomics (9)

Organisms

Homo sapiens (44)
Mus musculus (21)
Oryza sativa (6)
Arabidopsis thaliana (5)
Saccharomyces cerevisiae (4)
Nicotiana tabacum (2)
Chlorocebus sabaeus (2)
human oral metagenome (1)
Capra hircus (1)
Plasmodium chabaudi chabaudi (1)
Pan troglodytes (1)
Panonychus citri (1)
Caenorhabditis elegans (1)
Triticum aestivum (1)
Gallus gallus (1)
Rattus norvegicus (1)
Dendrobium huoshanense (1)
Giardia lamblia P15 (1)
Pseudomonas aeruginosa PAK (1)
Toxoplasma gondii VEG (1)

Repository

biostudies-arrayexpress (38)
pride (33)
MetaboLights (32)
iProX (21)
EGA (5)
MassIVE (4)

Tissue

Cell culture (8)
Liver (5)
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Disease

Normal (1)
Breast cancer (1)
Disease free (1)
Hepatocellular carcinoma (1)
Lymphoma (1)
Non-alcoholic steatohepatitis (1)

Technology Type

Mass Spectrometry (33)
Mass spectrometry assay (18)
Shotgun proteomics (17)
Mass spectrometry (13)
Affinity purification coupled with mass spectrometry proteomics (4)
Bottom-up proteomics (4)
SWATH MS (4)
Gel-based experiment (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Affinity proteomics (1)
Data-dependent acquisition (1)
MSE (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (12)
Liquid Chromatography MS - negative - reverse phase (11)
Liquid Chromatography MS - positive - hilic (7)
Liquid Chromatography MS - negative - hilic (6)
Liquid Chromatography MS - negative - reverse-phase (5)
Liquid Chromatography MS - positive - reverse-phase (5)
Orbitrap Fusion Lumos (2)
Gas Chromatography MS - (2)
Computer (1)
Agilent Bioanalyzer (1)
Not applicable (1)
Illumina NovaSeq X (1)
NextSeq 2000 (1)
Illumina HiSeq 1000 (1)
Illumina HiSeq 1500 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
Q Exactive (1)
TripleTOF 5600 (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - negative - HILIC (1)
Liquid Chromatography MS - negative - HILIC - Triple 6600 (AB Sciex) (1)
Liquid Chromatography MS - negative - HILIC - TripleTOF 6600 (AB Sciex) (1)
Liquid Chromatography MS - positive - HILIC (1)
Liquid Chromatography MS - positive - HILIC - TripleTOF 6600 (AB Sciex) (1)
Liquid Chromatography MS - positive - HILIC - TripleTOF 6600 (AB sciex) (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2025 (26)
2026 (17)
2024 (15)
2022 (14)
2012 (11)
2023 (7)
2021 (7)
2019 (7)
2014 (5)
2015 (4)
2011 (4)
2013 (2)
2010 (2)
2006 (2)
2009 (1)
2004 (1)
2020 (1)
2018 (1)
2017 (1)

CHEBI ID

CHEBI:16015 (10)
CHEBI:16704 (10)
CHEBI:17368 (10)
CHEBI:17596 (10)
CHEBI:15891 (9)
CHEBI:16335 (9)
CHEBI:16680 (8)
CHEBI:16750 (8)
CHEBI:16919 (8)
CHEBI:17295 (8)
CHEBI:17533 (8)
CHEBI:15633 (7)
CHEBI:15971 (7)
CHEBI:16027 (7)
CHEBI:16828 (7)
CHEBI:16927 (7)
CHEBI:17202 (7)
CHEBI:17509 (7)
CHEBI:17687 (7)
CHEBI:17802 (7)
CHEBI:17858 (7)
CHEBI:18107 (7)
CHEBI:18132 (7)
CHEBI:18295 (7)
CHEBI:21547 (7)
CHEBI:24813 (7)
CHEBI:73024 (7)
CHEBI:73688 (7)
CHEBI:15355 (6)
CHEBI:15373 (6)

Metabolite Name

Hypoxanthine (14)
Adenosine (13)
Creatine (13)
Uridine (13)
Cytosine (12)
Taurine (12)
Betaine (11)
Inosine (11)
Uracil (11)
Choline (10)
Histamine (10)
Phenylacetylglycine (10)
Riboflavin (10)
Xanthine (10)
Adenine (9)
Guanine (9)
Guanosine (9)
Indole (9)
L-Glutamate (9)
5-Methylcytosine (8)
Creatinine (8)
Cytidine (8)
Deoxyadenosine (8)
Deoxyinosine (8)
Dimethylglycine (8)
Glycine (8)
L-Histidine (8)
N-Acetylputrescine (8)
Sphingosine (8)
Thiamine (8)

Study type

Transcription profiling by array (13)
RNA-seq of coding RNA (9)
Transcription profiling by RT-PCR (5)
ChIP-seq (4)
Other (3)
RNA-seq of non coding RNA (2)
Comparative genomic hybridization by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (288)
2024 (233)
2022 (231)
2023 (223)
2021 (183)
2020 (123)
2019 (82)
2017 (50)
2016 (49)
2018 (44)
2015 (41)
2026 (35)
2012 (27)
2014 (23)
2013 (13)
2011 (11)
2009 (6)
2010 (4)
2008 (3)
2006 (2)
2007 (2)
2004 (1)
2005 (1)

Lab affiliation

Department of Clinical Laboratory, Shanghai Tenth People’s Hospital of Tongji University, Shanghai, 200072, China (2)
Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences (2)
The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institutes of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou 310022, China (2)
(1) Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium; (2) VIB Center for Plant Systems Biology, B-9052 Ghent, Belgium. (1)
Anonymity for double-blind review (1)
Center for Cell Lineage and Development, CAS Key Laboratory of Regenerative Biology, Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, GIBH-HKU Guangdong-Hong Kong Stem Cell and Regenerative Medicine Research Centre, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China. (1)
China Agricultural University (1)
College of Biology, Hunan University (1)
Department of Biochemistry, Purdue University, West Lafayette, IN USA (1)
Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Switzerland Faculty of Science, University of Zurich, Switzerland (1)
Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan 430060, China (1)
Department of Clinical Laboratory Medicine, Shanghai Tenth People’s Hospital of Tongji University, Shanghai, 200072, China (1)
Department of Developmental and Cell Biology, University of California, Irvine, Irvine, CA 92697, USA. (1)
Division of Endocrinology, Department of Internal Medicine, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China. (1)
ETH Zurich (1)
Jilin Medical University (1)
Nanjing Medical University (1)
Plant Molecular Biology Laboratory, School of Biological Sciences, the University of Hong Kong (1)
Plant molecular biology laboratory, School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China (1)
Plant system biolog of Ugent-VIB (1)
School of pharmaceutical science,Sun Yat-Sen University (1)
State Key Laboratory of Reproductive Medicine and China International Joint Research Center on Environment and Human Health, Nanjing Medical University (1)
State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, Gansu Province 730046, PR China (1)
The First Affiliated Hospital of Sun Yat-sen university (1)
UMass Chan Medical School (1)
VIB-UGent Center for Plant Systems Biology (1)
Weill Institute for Cell and Molecular Biology and Section of Plant Biology, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA (1)
Westlake University (1)
Zhejiang Sci-Tech University (1)
Zhejiang University (1)

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Characterization and gene expression analysis of the cir multi-gene family of Plasmodium chabaudi chabaudi (AS)

The pir genes comprise the largest multi-gene family in Plasmodium, with members found in P. vivax, P. knowlesi and the rodent malaria species. Despite comprising up to 5% of the parasite genome, little is known about the functions of the proteins encoded by pir genes. P. chabaudi causes chronic inf...

ORGANISM(S): Plasmodium chabaudi chabaudi

2012-05-31 | E-GEOD-33333 | biostudies-arrayexpress

Construction of Orthogonal Modular Proteinaceous Nanovaccine Delivery Vectors Based on mSA-Biotin Binding.

Not available

S-EPMC8911943 | biostudies-literature

Linked PNPLA3 polymorphisms confer susceptibility to nonalcoholic steatohepatitis and decreased viral load in chronic hepatitis B.

Not available

S-EPMC4515841 | biostudies-literature

Synergistic antitumor activity of pan-PI3K inhibition and immune checkpoint blockade in bladder cancer.

Not available

S-EPMC8562536 | biostudies-literature

Improvement of Aerosol Filtering Performance of PLLA/PAN Composite Fiber with Gradient Structure.

Not available

S-EPMC9697973 | biostudies-literature

Unveiling the unique role of TSPAN7 across tumors: a pan-cancer study incorporating retrospective clinical research and bioinformatic analysis.

Not available

S-EPMC11340126 | biostudies-literature

Pan-cancer analysis: predictive role of TAP1 in cancer prognosis and response to immunotherapy.

Not available

S-EPMC9912572 | biostudies-literature

Transcription profiling of brain in three adult humans and three adult chimpanzees

Gene expression profiling in brain of three adult humans and three adult chimpanzees

ORGANISM(S): Pan troglodytes

2004-05-27 | E-MEXP-43 | biostudies-arrayexpress

Josephin Domain Containing 2 (JOSD2) Inhibition as Pan-KRAS-Mutation-Targeting Strategy for Colorectal Cancer

KRAS is the most common mutated oncogenes in colorectal cancer (CRC), yet effective therapeutic strategies for targeting multiple KRAS-mutations remained challenging. The prolonged protein stability of KRAS mutants contribute to their robust tumor-promoting effects, but the underlying mechanism is e...

ORGANISM(S): Homo sapiens (Human)

2025-03-01 | PXD054525 | Pride

Small RNAs as important regulators for the hybrid vigour of super-hybrid rice

Heterosis is an important biological phenomenon; however, the role of small RNA (sRNA) in heterosis of hybrid rice remains poorly described. Here, we performed sRNA profiling of F1 super-hybrid rice LYP9 and its parents using high-throughput sequencing technology, and identified 355 distinct mature ...

ORGANISM(S): Oryza sativa

2014-08-17 | E-GEOD-51468 | biostudies-arrayexpress

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