Sort   by:  
 Page size 
ProteomicsMicroplastics and algal toxins in mussels: A dual threat to marine health and seafood safety
The molecular responses of marine mussels to contamination with emergent contaminants in marine ecosystems - the biotoxin Okadaic Acidc and Microplastics - was investigated in experiments with live mussels of the species Perna perna. In total 24 independent biological samples, from 4 experimental co...
ORGANISM(S): Perna perna 
2026-07-16 | PXD071829 | Pride
Shotgun proteomics  perna perna  environmental contamination  ecotoxicology 
MetabolomicsGNPS - SiTrap proteomics profiling of renal normal/tumor tissue pairs
These are supporting RAW files for 'Detergent-free simultaneous sample preparation method for proteomics and metabolomics' SiTrap method manuscript. Frozen renal tissue from three matched clear cell renal carcinoma (G2 pT3a, G2 pT1b, G1 pT2) /adjacent normal sample pairs were obtained from The Leeds...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-10-02 | MSV000084405 | GNPS
ProteomicsA quantitative model for macrophage activation predicts tunable distance thresholds for propagation of inflammationes in response LPS stimulation
Label free analysis of the secretome of RAW264.7 murine macrophages in response to LPS stimulation.
ORGANISM(S): Mus musculus (Mouse) 
2015-11-30 | PXD001905 | Pride
Lps Raw264.7 murine macrophages Label free Secretome 
MetabolomicsGNPS - SiTrap versus STrap comparison
These are supporting RAW files for the 'Detergent-free simultaneous sample preparation method for proteomics and metabolomics' SiTrap method manuscript. MDA-MB-231 cells were processed either by SiTrap methodology using SiTrap cellulose tips and two different extraction solutions or by STrap method ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-10-02 | MSV000084406 | GNPS
ProteomicsSiTrap proteomics profiling of renal normal/tumor tissue pairs
These are supporting RAW files for 'Detergent-free simultaneous sample preparation method for proteomics and metabolomics' SiTrap method manuscript. Frozen renal tissue from three matched clear cell renal carcinoma (G2 pT3a, G2 pT1b, G1 pT2) /adjacent normal sample pairs were obtained from The Leeds...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-10-02 | MSV000084405 | MassIVE
ProteomicsSiTrap versus STrap comparison
These are supporting RAW files for the 'Detergent-free simultaneous sample preparation method for proteomics and metabolomics' SiTrap method manuscript. MDA-MB-231 cells were processed either by SiTrap methodology using SiTrap cellulose tips and two different extraction solutions or by STrap method ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-10-02 | MSV000084406 | MassIVE
ProteomicsUnspecific Molecular Adsorption (UMA) sample preparation method for bottom-up and whole protein analysis. The foundation.
The protein sample preparation methods for shotgun proteomics are nowadays well established unlike the ones for whole protein analysis. The goal of my work has been to create a simple methodology which provides a single uncomplicated sample preparation tool for these two fields. Nowadays the bulk of...
ORGANISM(S): Bos Taurus (ncbitaxon:9913) Sus Scrofa (ncbitaxon:9823) Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
2026-02-08 | MSV000100759 | MassIVE
ProteomicsLC-MS/MS analysis of LINC01956-binding protein in GBM cells
LncRNAs interact with other cellular molecules, such as DNA, RNA and proteins, to regulate various biological processes. In our study, we demonstrated that LINC01956 promoted MGMT mRNA nuclear export and led to TMZ resistance. In order to elucidate the potential molecular mechanism of LINC01956 prom...
ORGANISM(S): Homo sapiens (Human) 
2024-10-28 | PXD055168 | Pride
Temozolomide Gbm cells Linc01956 
ProteomicsThe haemolymph proteome of Mytilus edulis: insights into the circulatory system and innate immunity of marine mussels
Mussels are a group of sessile and filter-feeding invertebrates, and are key structural elements of many marine and freshwater ecosystems. The mussel haemolymph is the first defense line to pathogen infection and inflammation with an innate immune response. Despite the importance of this body fluid ...
ORGANISM(S): Mytilus edulis (Blue mussel) 
2015-09-14 | PXD001951 | Pride
Innate immunity Shotgun proteomics Mytilus edulis Haemolymph Biomarker 
ProteomicsProteome wide measurements of protein half-lives in Mycoplasma pneumoniae
We obtained proteome wide measurements of protein half-lives in M. pneumoniae by performing pulse-chase experiments following SILAC methods. We estimated degradation rates of individual proteins by measuring the increase in light protein compared to heavy protein labeling along the growth curve.
ORGANISM(S): Mycoplasma pneumoniae (strain ATCC 29342 / M129) 
2020-11-24 | PXD016386 | Pride
Degradation rates Protein half-life Silac 
Sort   by:  
 Page size