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TranscriptomicsDisease-specific expression of host genes during downy mildew infection of Arabidopsis
Here we report on the identification of Arabidopsis genes that are induced during compatible but not during incompatible interactions with the downy mildew pathogen Hyaloperonospora arabidopsidis. This set of so-called compatible specific (CS) genes contrasts the large group of defence-associated ge...
ORGANISM(S): Arabidopsis thaliana 
2010-05-18 | E-GEOD-14946 | biostudies-arrayexpress
TranscriptomicsBiological variation between zebrafish development series
Transcriptome analysis during embryogenesis usually requires pooling of embryos to obtain sufficient RNA. Hence, the measured levels of gene-expression represent the average mRNA levels of pooled samples and the biological variation among individuals is lost for inclusion into statistical models use...
ORGANISM(S): Danio rerio 
2010-04-01 | E-GEOD-17736 | biostudies-arrayexpress
TranscriptomicsTechnical variation between RNA isolations from individual embryos
Transcriptome analysis during embryogenesis usually requires pooling of embryos to obtain sufficient RNA. Hence, the measured levels of gene-expression represent the average mRNA levels of pooled samples and the biological variation among individuals is lost for inclusion into statistical models use...
ORGANISM(S): Danio rerio 
2010-04-01 | E-GEOD-17738 | biostudies-arrayexpress
TranscriptomicsA novel aCGH method for non-model organisms for assessing genomes and de-novo transcriptome sequencing reads (Danio rerio)
Genomes and transcriptomes of non-model organisms can be analyzed using next-generation sequencing technologies, but de-novo sequencing and annotating a full eukaryotic genome is still challenging. So, -omics experimentation with non-model organisms requires a suite of technologies to obtain reliabl...
ORGANISM(S): Danio rerio 
2014-05-19 | E-GEOD-52121 | biostudies-arrayexpress
TranscriptomicsA novel aCGH method for non-model organisms for assessing genomes and de-novo transcriptome sequencing reads (Staphylococcus aureus)
Genomes and transcriptomes of non-model organisms can be analyzed using next-generation sequencing technologies, but de-novo sequencing and annotating a full eukaryotic genome is still challenging. So, -omics experimentation with non-model organisms requires a suite of technologies to obtain reliabl...
ORGANISM(S): Staphylococcus aureus 
2014-05-19 | E-GEOD-51148 | biostudies-arrayexpress
UnknownImproving quality of life in the elderly: hearing loss treatment with cochlear implants.
Not available
S-EPMC10768457 | biostudies-literature
UnknownOral or Topical Exposure to Glyphosate in Herbicide Formulation Impacts the Gut Microbiota and Survival Rates of Honey Bees.
Not available
S-EPMC7480383 | biostudies-literature
TranscriptomicsCombining Next-Generation Sequencing and Microarray Technology into a Transcriptomics Approach for the Non-Model Organism Chironomus riparius
Whole-transcriptome gene-expression analyses are commonly performed in species that have a sequenced genome and for which microarrays are commercially available. To do such analyses in species with no or limited genome data, i.e. non-model organisms, necessary transcriptomics resources, i.e. an anno...
ORGANISM(S): Anopheles gambiae 
2014-05-19 | E-GEOD-53449 | biostudies-arrayexpress
TranscriptomicsNCIC CTG MA.22 phase I/II trial of epirubicin and docetaxel in locally advanced breast cancer on 2-weekly or 3-weekly schedules
This phase I/II neoadjuvant trial determined maximally-tolerated doses (MTD), dose-limiting toxicities (DLT), response-to-therapy, and explored the role of new response biomarkers. The combination regimens were delivered with acceptable toxicity, good clinical response, inducing changes in tumor RNA...
ORGANISM(S): Homo sapiens 
2015-11-11 | E-GEOD-66999 | biostudies-arrayexpress
TranscriptomicsPrevotella ruminicola 23: Growth on different carbohydrate sources
The transcriptional responses of Prevotella ruminicola were determined during growth on 20 different carbohydrate sources including mono-, di- and tri- saccharides, oligosaccharides, polymeric xylan and complete plant material with the aim of obtaining a more complete understanding of the number of ...
ORGANISM(S): Prevotella ruminicola 
2010-09-15 | E-GEOD-19088 | biostudies-arrayexpress
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