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TranscriptomicsChromatin immunoprecipitation of TBP, NC2alpha, NC2beta, Mot1p, Spt20p, Taf1p and Rpb3p in yeast grown at 4% and shifted to 0.1% glucose
ChIP-chip of TBP, NC2alpha, NC2beta, Mot1p, Spt20p, Taf1p and Rpb3p of cells grown at 4% and shifted to 0.1% glucose.
ORGANISM(S): Saccharomyces cerevisiae 
2008-09-01 | E-MTAB-21 | biostudies-arrayexpress
TranscriptomicsChromatin immunoprecipitation of yeast to analyze of TATA-binding protein turnover
Analysis of TATA-binding protein turnover using ChIP-chip.
ORGANISM(S): Saccharomyces cerevisiae 
2009-09-19 | E-MTAB-58 | biostudies-arrayexpress
TranscriptomicsMicroRNAs regulate DC maturation via M-CSFR
We identify a panel of microRNAs that are differentially expressed during both spontaneous and LPS-induced DC maturation and show the M-CSF receptor (M-CSFR) as a key target for microRNA-mediated regulation. MicroRNA-22, -34a and -155 are up-regulated in mature GM-CSF-generated DC and mediate M-CSFR...
ORGANISM(S): Mus musculus 
2013-11-04 | E-MEXP-3311 | biostudies-arrayexpress
TranscriptomicsDeletion mutant analysis of established glucose signaling and metabolic pathway members in Saccharomyces cerevisiae
To understand the organisation of the glucose regulatory system, we analysed 91 deletion mutants of established glucose signalling and metabolic pathway members in Saccharomyces cerevisiae by DNA microarrays. These deletion mutants do not induce pathway-specific transcriptional responses reflecting ...
ORGANISM(S): Saccharomyces cerevisiae 
2012-06-17 | E-GEOD-33097 | biostudies-arrayexpress
TranscriptomicsGlucose-depletion time-course experiment in Saccharomyces cerevisiae wild-type cells.
To investigate the glucose regulatory system in Saccharomyces cerevisiae, we conducted a time-course in which glucose-depleted wildtype (WT) cells were inoculated into fresh media (SC, 2% glucose). Their subsequent transcriptional output was monitored over a period of five hours by DNA microarrays: ...
ORGANISM(S): Saccharomyces cerevisiae 
2012-06-17 | E-GEOD-33098 | biostudies-arrayexpress
TranscriptomicsStationary phase timecourse
Nine day glucose starvation stationary phase culture, exit and entry from quiescence
ORGANISM(S): Saccharomyces cerevisiae 
2005-04-15 | E-UMCU-12 | biostudies-arrayexpress
TranscriptomicscDNA microarray profiles of canine mammary tumour cell lines reveal deregulated pathways pertaining to their phenotype
Mammary cancer is the most common type of cancer in female dogs with a lifetime risk of over 24% when dogs are not spayed. The elucidation of the complete canine genome opens new areas for development of cancer therapies. These should be tested first by in vitro models such as cell lines. However, t...
ORGANISM(S): Canis lupus familiaris 
2007-09-01 | E-GEOD-7659 | biostudies-arrayexpress
TranscriptomicsSlx5_Slx8_Genome_Stability
The Saccharomyces cerevisiae Slx5/8 complex is the founding member of a recently defined class of ubiquitin ligases (STUbLs) that target sumoylated substrates. Slx5/8 has been implicated in genome stability and transcription, but the precise contribution to these processes is not clear. To character...
ORGANISM(S): Saccharomyces cerevisiae 
2013-08-06 | E-GEOD-33929 | biostudies-arrayexpress
TranscriptomicsGlucose signaling
This SuperSeries is composed of the following subset Series: GSE33097: Deletion mutant analysis of established glucose signaling and metabolic pathway members in Saccharomyces cerevisiae. GSE33098: Glucose-depletion time-course experiment in Saccharomyces cerevisiae wild-type cells. Refer to individ...
ORGANISM(S): Saccharomyces cerevisiae 
2012-06-17 | E-GEOD-33099 | biostudies-arrayexpress
TranscriptomicsPairwise comparison stationary phase vs mid-log
A pairwise comparison was performed between stationary phase specific samples and mid-log samples using four replicates and dye-swaps
ORGANISM(S): Saccharomyces cerevisiae 
2005-04-15 | E-UMCU-13 | biostudies-arrayexpress
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