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GenomicsNeuromesodermal Progenitors are a Conserved Source of Spinal Cord with Divergent Growth Dynamics
Neuromesodermal Progenitors are a Conserved Source of Spinal Cord with Divergent Growth Dynamics
PRJNA495749 | ENA
GenomicsSpatial transcriptomics unveils ZBTB11 as a regulator of cardiomyocyte degeneration in cardiomyopathy
Spatial transcriptomics unveils ZBTB11 as a regulator of cardiomyocyte degeneration in cardiomyopathy
PRJNA472606 | ENA
GenomicsSingle-cell staging of meiotic entry identifies a sequential order in meiotic sex chromosome activation
Single-cell staging of meiotic entry identifies a sequential order in meiotic sex chromosome activation
PRJNA472624 | ENA
TranscriptomicsRNA sequencing reveals two major classes of gene expression levels in metazoan cells
The expression level of a gene is often used as a proxy for determining whether the protein or RNA product is functional in a cell or tissue. Therefore, it is of fundamental importance to understand the global distribution of gene expression levels, and to be able to interpret it mechanistically and...
ORGANISM(S): Mus musculus 
2011-04-16 | E-GEOD-28666 | biostudies-arrayexpress
TranscriptomicsSingle-cell RNA-seq of Ecad positive PyMT bulk tumor cells
In this study we studied the presence of tumor cells that underwent epithelial-to-mesenchymal transition within polyoma middle T antigen (PyMT) breast tumors. For this we dissociated tumors and isolated Ecad positive tumor cells by FACS sorting. We confirmed that PyMT tumors contain a small set of t...
ORGANISM(S): Mus musculus 
2016-03-09 | E-GEOD-77107 | biostudies-arrayexpress
GenomicsSpatial Transcriptomics of C. elegans Males and Hermaphrodites Identifies Sex-Specific Differences in Gene Expression Patterns
Spatial Transcriptomics of C. elegans Males and Hermaphrodites Identifies Sex-Specific Differences in Gene Expression Patterns
PRJNA472377 | ENA
TranscriptomicsCUT&RUN of HOXA6 and HOXB6 in neuronal-derived human embryonic stem cells
CUT&RUN analysis of HOXA6 and HOXB6 binding sites in neuronal-derived human embryonic stem cells
ORGANISM(S): Homo sapiens 
2024-04-30 | E-MTAB-13627 | biostudies-arrayexpress
TranscriptomicsProspective derivation of a 'Living Organoid Biobank' of colorectal cancer patients
In Rspondin-based three-dimensional cultures, Lgr5 stem cells from multiple organs form ever-expanding epithelial organoids that retain their tissue identity. Here we report the establishment of tumor organoid cultures from 20 consecutive colorectal carcinoma (CRC) patients. For most, organoids were...
ORGANISM(S): Homo sapiens 
2015-05-07 | E-GEOD-65253 | biostudies-arrayexpress
GenomicsSingle-cell sequencing reveals dissociation-induced gene expression in tissue subpopulations
Single-cell sequencing reveals dissociation-induced gene expression in tissue subpopulations
PRJNA339266 | ENA
ProteomicsDifferential stoichiometry among core ribosomal proteins
Understanding the regulation and structure of ribosomes is essential to understanding protein synthesis and its dysregulation in disease. While ribosomes are believed to have a fixed stoichiometry among their core ribosomal proteins (RPs), some experiments suggest a more variable composition. Testi...
ORGANISM(S): Saccharomycetales (ncbitaxon:4892) Mus Musculus (ncbitaxon:10090) 
2015-08-28 | MSV000079280 | MassIVE
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