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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Gene expression changes in Hebeloma cylindrosporum- Pinus pinaster ectomycorrhizal root tips compared to Hebeloma cylindrosporum free-living mycelium

ABSTRACT: Illumina HiSeq technology was used to generate mRNA profiles from Hebeloma cylindrosporum ectomycorrhizal root tips compared to free-living mycelium . Ectomycorrhizal root tips and control mycelium were harvested after 3 weeks and used for RNA extraction. Reads of 150 bp were generated and aligned to Hebeloma cylindrosporum transcripts (http://genome.jgi-psf.org/Hebcy2) using CLC Genomics Workbench 7. mRNA profiles from Hebeloma cylindrosporum ectomycorrhizal root tips and free-living mycelium were generated by Illumina HiSeq2000 sequencing (150bp). Three biological replicates were sequenced for mycorrhizal and mycelium samples.

ORGANISM(S): Hebeloma cylindrosporum

SUBMITTER: Annegret Kohler

PROVIDER: E-GEOD-63868 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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