Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

19 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Whole genome sequencing of unstable tebuconazole adaptors in Candida albicans

ABSTRACT: Two tebuconazole adaptors, TJ1503 and TJ1669, were unstable. On YPD-agar plates, they gave rise to small (S) and large (L) colonies. We sequenced both types of colonies. TJ1503S and TJ1669S were the S colonies. TJ1503L and TJ1669L were the large colonies.

INSTRUMENT(S): DNBSEQ-T7

ORGANISM(S): Candida albicans

SUBMITTER: Sun Liuliu

PROVIDER: E-MTAB-13209 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Whole genome sequencing of papillary colonies on YPD plate supplemented with tebuconazole in Candida albicans

Project description:Candida albicans lab strain SC5314 was spotted on YPD plates supplemented with 0.25-16 μg/ml tebuconazole. Randomly at least 4 papillary colonies from each plate were sequenced.

2023-08-31 | E-MTAB-13245 | biostudies-arrayexpress

H99 derived uniconzole (0.25ug/mL and 2ug/mL) adaptors

Project description:H99 derived 2 ug/mL uniconazole adaptors: Approximately 1 million cells of Crypotoccus neoformans lab strain H99 were spread on YPD-agar plate supplemented with 2 ug/mL uniconazole. After 5 days incubation of the plate at 30℃, randomly 30 adaptors were chosen. 21 adaptors were resistant and were sequenced. H99 derived 0.25 ug/mL uniconazole adaptors: Cells of H99 were adjusted to 2500 cells/mL. The culture was supplemented with 0.25 ug/mL uniconazole. After 72 h incubation, the culture was washed, diluted and approximately 200 cells were spread on YPD-agar plate. Randomly 95 colonies were tested for resistance to uniconazole. One colony (TJ3832) was resistant and was sequenced.

2024-04-30 | E-MTAB-14025 | biostudies-arrayexpress

Whole genome sequencing of fluconazole-resistant mutants in Candida haemulonii

Project description:Candida haemulonii wild type strain TJ180 were expsoured to 64 and 128 μg/ml fluconazole. 14 resistant mutants as well as the parent were sequenced.

2024-01-10 | E-MTAB-13199 | biostudies-arrayexpress

Whole genome sequencing of deletion strains of Candida albicans CDR1, CDR2, MDR1, CMP1, CNB1 and CRZ1 derived tebuconazole adaptors

Project description:From C. albicans reference strain SC5314, CDR1, CDR2, MDR1, CMP1, CNB1, CRZ1 were deleted. The deletion strains were spread on YPD plates supplemented with tebuconazole. Randomly 4 adaptors derived from each deletion strain were sequenced.

2023-08-09 | E-MTAB-13238 | biostudies-arrayexpress

AFR1 deletion strain derived uniconazole adaptors

Project description:Gene AFR1 was deleted from Cryptococcus neoformans lab strain H99. Approximately 1 million cells of the deletion strain were spread on YPD-agar plate supplemented with 0.125ug/mL uniconazole. Randomly 30 adaptors were chosen. 16 adaptors were resistant to uniconazole and were sequenced.

2024-04-30 | E-MTAB-14026 | biostudies-arrayexpress

H99 derived Uniconazole (1ug/mL) adaptors

Project description:Approximately 1 million cells of Crypotoccus neoformans lab strain H99 were spread on YPD-agar plate supplemented with 1 ug/mL uniconazole. After 5 days incubation of the plate at 30℃, randomly 30 adaptors were chosen and sequenced.

2024-04-30 | E-MTAB-14024 | biostudies-arrayexpress

Genome instability analysis of aneuploids in Candida albicans

Project description:In Candida albicans, one strain (TJ1031) has segmental monosomy of chromosome R from rDNA to the right tolemere. This strain was unstable, yielding small and large colonies on YPD plate. Randomly 5 large colonies were sequenced.

2023-05-03 | E-MTAB-12341 | biostudies-arrayexpress

Whole genome sequencing of spontaneous revertants derived from aneuploid Candida albicans strains

Project description:In Candida albicans, aneuploids are unstable. When grown on YPD-agar plates, aneuploids exhibit colony size variations. In this study, 6 aneuploid strains were spread on YPD-agar plates. The large colonies from each strain were sequenced. The small colonies were sequenced in another project.

2023-05-05 | E-MTAB-12409 | biostudies-arrayexpress

Whole genome sequencing of adaptors derived from exposure to low amount of fluconazole in Candida albicans

Project description:Candida albicans lab strain SC5314 was exposued to sub-inhibitory amount (0.5 ug/ml) fluconazole for 24h. Two tolerant adaptors (FY1284 and FY1285) were obtained. The adaptors were unstable on YPD plate, yielding small (S) and large (L) colonies. The small (FY1284-S and FY1285-S) and the large (FY1284-L and FY1285-L) colonies were sequenced

2022-07-18 | E-MTAB-11923 | biostudies-arrayexpress

Whole genome sequencing of aureobasidin A adaptors derived from SC5314 during short time exposure to sub-MIC concentration of aureobasidin A

Project description:Candida albicans lab strain SC5314 was grown in YPD broth supplemented with sub-MIC concentration (5 ng/ml) of aureobasidin A (AbA) for 24h. The culture was then washed and diluted with distilled water. Approximately 200 cells were spread on YPD agar plate. Randomly 40 colonies were tested with spot assay for tolerance to AbA. 21 colonies were tolerant and were sequenced.

2022-12-04 | E-MTAB-12400 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data