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Multi-platform single cell transcriptomic profiling as a benchmarking resource

ABSTRACT: In this study, we perform comparative analysis of Illumina HiSeq and BGISEQ-500 sequencing platforms for single-cell transcriptomics data. We performed scRNA-seq on a homogenous population of mouse embryonic stem cells along with two kinds of control spike-in molecules and sequenced across both sequencing platforms. The matched Illumina platform datasets can be found with accession numbers (E-MTAB-5483, E-MTAB-5484, E-MTAB-5485). The additional data comparison performed in the study can be found (BioProject# PRJNA430491, SRA# SRP132313 and CNBG# CNP0000075).

INSTRUMENT(S): BGISEQ-500

ORGANISM(S): Mus musculus

SUBMITTER: Zhichao Miao

PROVIDER: E-MTAB-7239 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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