SNP discovery and genotyping using Genotyping-by-Sequencing in Pekin ducks.
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ABSTRACT:
SUBMITTER: Zhu F
PROVIDER: S-EPMC5109183 | biostudies-literature | 2016 Nov
REPOSITORIES: biostudies-literature
Publications
SNP discovery and genotyping using Genotyping-by-Sequencing in Pekin ducks.
Zhu Feng F Cui Qian-Qian QQ Hou Zhuo-Cheng ZC
Scientific reports 20161115
Genomic selection and genome-wide association studies need thousands to millions of SNPs. However, many non-model species do not have reference chips for detecting variation. Our goal was to develop and validate an inexpensive but effective method for detecting SNP variation. Genotyping by sequencing (GBS) can be a highly efficient strategy for genome-wide SNP detection, as an alternative to microarray chips. Here, we developed a GBS protocol for ducks and tested it to genotype 49 Pekin ducks. A ...[more]
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2016-12-27 | GSE92920 | GEO