Transcriptomics

Dataset Information

0

G-Protein-Coupled Receptor 68 Negatively Regulates IL-22 Production in Human Th17 Cells


ABSTRACT: Purpose: To identify novel genes regulated by the aryl hydrocarbon receptor that influence human Th17 cell function. Methods: Naïve CD4 T cells from peripheral blood of six healthy human volunteers were cultured under four experimental conditions for three days: anti-CD3 and anti-CD28 antibodies (Media control), Media with Th17 conditions (IL-6, TGF-b, IL-1b, IL-23), Th17+FICZ and Th17+CH223191. Total RNA was extracted from each sample on day 3 and sequenced in a paired-end 2x50bp strategy on an Illumina HiSeq1500. A total of six donors were analyzed. Results: AhR activation with FICZ suppressed IL-17 production from human CD4 T cells and increased IL-22. AhR inhibition with CH223191 potently suppressed IL-22 and modestly increased IL-17 production. On day 3, the number of significantly regulated genes for each treatment were 975 (Th17), 88 (Th17+FICZ) and 142 (Th17+CH223191). 11 common genes were significantly regulated by all three treatments. One of these, GPR68, was investigated further in functional studies since its expression correlated with IL-22 production. Activation of GPR68 with a positive allosteric modulator suppressed IL-22 concentrations in human Th17 cell cultures. Conclusions: Our study demonstrates that GPR68 activation can negatively regulate IL-22 production from human CD4 T cells in the presence of an AhR agonist. RNA-seq is a powerful method to identify novel gene targets that regulate cytokines involved in chronic inflammatory diseases.

ORGANISM(S): Homo sapiens

PROVIDER: GSE102045 | GEO | 2018/07/19

REPOSITORIES: GEO

Similar Datasets

2021-01-27 | GSE149169 | GEO
2012-07-11 | E-GEOD-22877 | biostudies-arrayexpress
2019-01-02 | E-MTAB-4076 | biostudies-arrayexpress
2012-07-12 | GSE22877 | GEO
2020-05-26 | PXD010612 | Pride
2009-03-03 | E-GEOD-15029 | biostudies-arrayexpress
2008-06-16 | E-GEOD-9316 | biostudies-arrayexpress
2016-10-25 | GSE89133 | GEO
2007-10-17 | GSE9316 | GEO
2011-04-24 | E-GEOD-27158 | biostudies-arrayexpress