Transcriptomics

Dataset Information

20

Expression profiling of prospero mutant VNC cells in Drosophila embryos


ABSTRACT: Paper abstract: Stem cells have the remarkable ability to give rise to both self-renewing and differentiating daughter cells. Drosophila neural stem cells segregate cell-fate determinants from the self-renewing cell to the differentiating daughter at each division. Here, we show that one such determinant, the homeodomain transcription factor Prospero, regulates the choice between stem cell self-renewal and differentiation. We have identified the in vivo targets of Prospero throughout the entire genome. We show that Prospero represses genes required for self-renewal, such as stem cell fate genes and cell-cycle genes. Surprisingly, Prospero is also required to activate genes for terminal differentiation. We further show that in the absence of Prospero, differentiating daughters revert to a stem cell-like fate: they express markers of self-renewal, exhibit increased proliferation, and fail to differentiate. These results define a blueprint for the transition from stem cell self-renewal to terminal differentiation. Overall design: 6 wildtype samples and 6 prospero mutant samples were hybridised to arrays against a commom reference sample (generated from whole embryo cDNA). The prospero samples were indirectly compared to the wildtype samples via the common reference. Half the wildtype and half of the prospero arrays were dye-swapped.

INSTRUMENT(S): INDAC_CAM_FL002

ORGANISM(S): Drosophila melanogaster  

SUBMITTER: Tony David Southall   

PROVIDER: GSE18213 | GEO | 2009-10-01

SECONDARY ACCESSION(S): PRJNA119583

REPOSITORIES: GEO

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