Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

GNPS_MassIVE_SKKU pharmacy_plants collection

ABSTRACT: GNPS_MassIVE Plant Collection_Sungkyunkwan University College of Pharmacy

INSTRUMENT(S): 6545 Q-TOF LC/MS

ORGANISM(S): Skku_plants

SUBMITTER: Lee Bum Soo, Jeong Se Yun, Lee Da Eun

PROVIDER: MSV000090975 | GNPS | Wed Dec 28 17:43:00 GMT 2022

REPOSITORIES: GNPS

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

VEGF orchestration of the p130Cas Interactome

Project description:p130Cas is a polyvalent adapter protein essential for cardiovascular development, and with a key role in cell movement. In order to identify the pathways by which p130Cas exerts its biological functions in endothelial cells we mapped the p130Cas interactome and its dynamic changes in response to VEGF using high-resolution mass spectrometry and reconstruction of protein interaction (PPI) networks with the aid of multiple PPI databases. The work presented here was based on a collaboration between University College London and University College Dublin. Dr Ian Evans (first author) and Prof. Ian Zachary (lab head), can be contacted at: Centre for Cardiovascular Biology and Medicine, Division of Medicine The Rayne Building, University College London, London WC1E 6JJ, United Kingdom. Contact details for University College Dublin collaborators can be found below.

2017-01-02 | PXD003902 | Pride

Propionic acid outperforms formic and acetic acid in MS sensitivity for high-flow reversed-phase LC-MS bottom-up proteomics (I)

Project description:The study aimed to assess the effect of substituting formic and acetic acids for propionic acid on electrospray ionization and chromatographic performance in reversed-phase LC-MS bottom-up proteomics. The deposit contains LC-MS data acquired at the Faculty of Pharmacy, Charles University, and Biomedical Research Centre, Hradec Králové, Czech Republic. To access the data from other facilities, please refer to the manuscript.

2026-04-07 | PXD069554 | Pride

VEGF orchestration of the p130Cas Interactome

2017-04-01 | MSV000080860 | MassIVE

GNPS Burkholderia FERM BP-3421 dataset

Project description:This Dataset contains files investigating the metabolism of Burkholderia sp. FERM BP-3421. This whole set of data was collected and stored in Eustaquio Lab (the University of Illinois at Chicago - College of Pharmacy) and deposited on GNPS-Massive on 11/03/2022

2022-11-03 | MSV000090637 | GNPS

Gene expression in microglia cells related to the development of post-traumatic stress disorder (PTSD)

Project description:The research was conducted by in-vitro experiments on microglial cells, performed by Wildman lab and Uddin research group in the College of Public Health at the University of the South Florida. The experiments mimic the trauma-related immune environments by utilizing stress hormones. Stress hormones can modify individual internal environment during times of stress, mobilizing energy sources, increasing heart rate, and downregulating metabolic processes

2022-12-06 | GSE219208 | GEO

Analysis of gastric microbiota by pyrosequencing in Korea

Project description:Sequencing of 16S ribosomal RNA (rRNA) gene, which has improved the characterization of microbial community, has made it possible to detect a low level Helicobacter pylori (HP) sequences even in HP-negative subjects which were determined by a combination of conventional methods. This study was conducted to obtain a cutoff value for HP colonization in gastric mucosa biopsies and gastric juices by the pyrosequencing method. Corresponding author: Nayoung Kim, Department of Internal Medicine, Seoul National University Bundang Hospital, Seoungnam, Gyeonggi-do, Korea; Department of Internal Medicine and Liver Research Institute, Seoul National University College of Medicine, Seoul, Korea (Tel., +82-31-787-7008; e-mail, nayoungkim49@empas.com).

2014-09-18 | GSE61493 | GEO

Prunus mira

Project description:College of Life Science, Northeast Forestry University Proteomic

| PRJNA718764 | ENA

Critical Period Inhibition of NKCC1 Rectifies Synapse Development and Restores Adult Tactile Response Maps in Fragile X Mice

Project description:Qionger He1, Erica D Arroyo2, Samuel N Smukowski3, Jian Xu, Claire Piochon1, Jeffrey N Savas3, Carlos Portera-Cailliau2 and Anis Contractor1,4* 1Department of Physiology & 3Department of Neurology, Northwestern University Feinberg School of Medicine; 2Departments of Neurology and Neurobiology, David Geffen School of Medicine at UCLA, Los Angeles, CA 90095 & 4Department of Neurobiology, Weinberg College of Arts and Sciences, Northwestern University, Chicago, IL 60611

| MSV000081526 | MassIVE

Sex specificity of the C. elegans metabolome

Project description:Sex specificity of the C. elegans metabolome Russell N. Burkhardt1, Alexander B. Artyukhin1,3, Erin Z. Aprison2, Brian J. Curtis1, Bennett W. Fox1, Andreas H. Ludewig1, Amaresh Chaturbedi4, Oishika Panda1, Chester J. J. Wrobel1, Siu S. Lee4, Ilya Ruvinsky2, and Frank C. Schroeder1, 1Boyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States 2Department of Molecular Biosciences, Northwestern University, Evanston, IL 60208, United States 3Current address: Chemistry Department, College of Environmental Science and Forestry, State University of New York, Syracuse, New York 13210, United States 4Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, United States Correspondence to fs31@cornell.edu

2022-07-25 | MSV000089965 | MassIVE

Tandem Mass Tag (TMT)-coupled LC-MS/MS in OA and RA patients synovial tissues

Project description:All the synovial tissue specimens for TMT relative quantitative proteomics and further experiments were obtained from the patients with RA or OA undergoing surgical joint replacement at the clinical of joint surgery (Xi'an Hong Hui Hospital, Xi'an Jiaotong University, China). The diagnosis of the patients were accorded to the criteria of the American College of Rheumatology (ACR) and European League Against Rheumatism (EULAR) in 2010.a quantitative proteomic profiling of synovial tissue obtained from RA and OA patients was carried out by using TMT labeling followed by high resolution mass spectrometry analysis. We have identified 4822 proteins out of which 510 proteins were found to be differentially expressed by ≥1.2 fold change in the synovial tissue from RA verses OA patients.

2021-12-30 | PXD027703 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data