Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Chlamydomonas reinhardtii

ABSTRACT: RNA-seq analysis for Chlamydomonas in lcr1 mutant

PROVIDER: PRJDB17220 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR522897_1.fastq.gz	Fastqsanger.gz
	DRR522897_2.fastq.gz	Fastqsanger.gz
	DRR522898_1.fastq.gz	Fastqsanger.gz
	DRR522898_2.fastq.gz	Fastqsanger.gz
	DRR522899_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 72

Similar Datasets

Chlamydomonas reinhardtii

Project description:RNA-seq analysis for Chlamydomonas in saga1 mutant

| PRJDB15122 | ENA

Small RNAs in Chlamydomonas reinhardtii

Project description:RNA populations in Chlamydomonas reinhardtii Keywords: Highly parallel pyrosequencing

2007-05-16 | GSE7308 | GEO

Chlamydomonas reinhardtii

Project description:RNA-seq analysis for Chlamydomonas in ccm1 and cbp1 mutant

| PRJDB17792 | ENA

Transcriptomics analysis of the Chlamydomonas reinhardtii diurnal cycle.

Project description:Here, we report a transcriptomics analysis on a day in the life of Chlamydomonas reinhardtii. Cultures of this unicellular alga were grown in photobioreactors on a 12 h light / 12 h dark cycle. Samples were collected at regular intervals and subjected to a transcriptomics analysis by RNA-Seq.

2019-01-03 | GSE112394 | GEO

Transcriptome analysis of Chlamydomonas reinhardtii chloroplast and mitochondria

Project description:Here, we report on the transcriptome of the organelles of the micro-alga, Chlamydomonas reinhardtii, sampled under a number of different conditions. The preparation of the RNA-Seq libraries and their analysis were performed using protocols optimized for organellar transcripts. Samples include growth in media +/– Fe, growth in media +/– Cu, diurnal growth samples collected in dark and light, and the sexual cycle.

2017-11-27 | GSE101944 | GEO

Chlamydomonas reinhardtii strain:C9

Project description:RNA-seq analysis for Chlamydomonas in H82 (cas mutant)

| PRJDB4595 | ENA

Small RNAs in Chlamydomonas reinhardtii

Project description:RNA populations in Chlamydomonas reinhardtii Keywords: Highly parallel pyrosequencing Small RNAs were prepared from Chlamydomonas reinhardtii total extracts,ligated to a 3' adaptor and a 5' acceptor sequentially, and then RT-PCR amplified. PCR products were reamplified using a pair of 454 cloning primers and provided to 454 Life Sciences (Branford, CT) for sequencing. For technical details, see Tao Zhao, Guanglin Li, Shijun Mi, Shan Li, Gregory J. Hannon, Xiu-Jie Wang, and Yijun Qi. 2007. A Complex System of Small RNAs in the Unicellular Green Alga Chlamydomonas reinhardtii. Genes & Development

2007-05-15 | E-GEOD-7308 | biostudies-arrayexpress

Chlamydomonas reinhardtii strain:C9

Project description:RNA-seq for Chlamydomonas tar1-1 mutant

| PRJDB3021 | ENA

Endogenous small RNAs from Chlamydomonas reinhardtii strain J3(mt-) vegetative cells

Project description:endogenous small RNAs from Chlamydomonas reinhardtii strain J3(mt-) vegetative cells Keywords: High throughput 454 small RNA sequencing

2007-06-04 | GSE7575 | GEO

Transcriptomics study of excess Mn (1000 uM) in Chlamydomonas reinhardtii

Project description:Liquid cultures of the unicellular green alga, Chlamydomonas reinhardtii were grown in media with 6 uM Mn (control) or 1000 uM Mn (experimental), and analyzed by RNA-Seq to identify genes that are differentially expressed in response to excess Mn.

2022-03-25 | GSE169756 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data