Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq from tibialis muscles from rats aged 15 months (adult) and 27 months (old)

ABSTRACT: RNA-seq from tibialis muscles from rats aged 15 months (adult) and 27 months (old)

PROVIDER: PRJEB45743 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR6066750_1.fastq.gz	Fastqsanger.gz
	ERR6066750_2.fastq.gz	Fastqsanger.gz
	ERR6066760_1.fastq.gz	Fastqsanger.gz
	ERR6066760_2.fastq.gz	Fastqsanger.gz
	ERR6066751_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 50

Similar Datasets

RNA-seq from tibialis muscles from rats aged 15 months (adult) and 27 months (old)

Project description:To gain new insights into molecular changes in skeletal muscle aging and disease with a special focus on differential alternative splicing and senescence, we performed RNA-seq on tibialis muscles from 15 months old (adult, a) and 27 months old (old, o) rats. Whole (w) muscle samples were prepared for both age groups (w/a and w/o). Additionally, for both age groups, muscle fibers were isolated. For adult rats, this resulted in one group (f/a). For old rats, fibers were subjected to Laser capture microdissection guided by expression of aging markers Tmem158 and Cdkn1a, giving rise to two groups, aging marker-positive fibers (f/o+) and aging marker-negative fibers (f/o-). The entire experiment comprises 5 groups (w/a, w/o, f/a, f/o+, f/o-), with 5 animals per group, ie. 25 samples total.

2021-06-26 | E-MTAB-10582 | biostudies-arrayexpress

RNA-seq from gastrocnemius muscles from rats aged 6, 12, 18, 21, 24 and 27 months

Project description:To gain new insights into molecular changes in skeletal muscle aging and disease with a special focus on differential alternative splicing and senescence, we performed RNA-seq on rat gastrocnemius muscles of animals aged 6, 12, 18, 21, 24 and 27 months, using a rat sarcopenia model we had previously established.

2021-06-26 | E-MTAB-10583 | biostudies-arrayexpress

RNA-seq of muscles from young and aged ATF4 mKO mice and littermate controls

Project description:To investigate the roles of ATF4 in skeletal muscle aging we generated muscle-specific ATF4 knockout (ATF4 mKO) mice. We then performed gene expression profiling analysis using data obtained from RNA-seq of tibialis anterior muscles at 6-months and 22-months of age.

2023-05-02 | GSE212675 | GEO

Proteomics study in male C57BL6 tibialis anterior and psoas skeletal muscles.

Project description:This project contains proteomics data obtained from 8 weeks old tibialis anterior and psoas skeletal muscles from c57bl6 and BlaJ male mice.

2025-05-07 | PXD056568 | Pride

RNA-seq from gastrocnemius muscles from rats aged 6, 12, 18, 21, 24 and 27 months

Project description:RNA-seq from gastrocnemius muscles from rats aged 6, 12, 18, 21, 24 and 27 months

| PRJEB45746 | ENA

Transcription profiling of mouse masseter and tibialis anterior muscles to determine expression differences between muscle groups

Project description:Masseter and Tibialis anterior muscles from adult female control mice to determine expression differences between muscle groups

2007-10-11 | E-MEXP-1288 | biostudies-arrayexpress

Nr2f6 electroporation in tibialis anterior promotes muscle weakness

Project description:Mouse tibialis anterior muscles were electroporated with Nr2f6-myc plasmid or pCMV6 empty vector in the contralateral leg. After 9 days, muscles were collected, and the RNA extracted and processed for microarray analysis.

2024-03-31 | GSE228202 | GEO

Circadian transcriptome of fast tibialis anterior (TA) and slow soleus (SOL) skeletal muscles from muscle-specific Bmal1 KO and control Cre- littermates

2014-01-01 | GSE43071 | GEO

Circadian transcriptome of fast tibialis anterior (TA) and slow soleus (SOL) skeletal muscles from muscle-specific Bmal1 KO and control Cre- littermates

Project description:To investigate the role of the circadian clock gene Bmal1 in skeletal muscle, we compared the circadian transcriptomes of fast tibialis anterior (TA) and slow soleus (SOL) skeletal muscles from muscle-specific Bmal1 KO (mKO) and their control Cre- littermates (Ctrl). Keyword: Circadian Transcriptome, time course 72 samples were analyzed, comprised of 4 experimental groups (Ctrl SOL, mKO SOL, Ctrl TA, mKO TA), with 3 biological replicates for each time point sampled every 4 hours for 24 hours. SOL and TA muscles were collected from the same animals, as indicated by Source Animal ID data column

2014-01-01 | E-GEOD-43071 | biostudies-arrayexpress

Temporal gene expression with 30 days 'spillover' resistance training in the rat tibialis anterior muscle delivered with implantable pulse generators.

Project description:Global gene expression patterns were determined from NGS on hypertrophying tibialis anterior muscles after 2, 10, 20 and 30 days resistance training (1 hour post exercise) and control muscles.

2023-01-25 | GSE196147 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data