Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Stomach microbiome analysis in C57BL/6J mice

PROVIDER: PRJNA1106813 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR28865700_1.fastq.gz	Fastqsanger.gz
	SRR28865700_2.fastq.gz	Fastqsanger.gz
	SRR28865701_1.fastq.gz	Fastqsanger.gz
	SRR28865701_2.fastq.gz	Fastqsanger.gz
	SRR28865702_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 94

Similar Datasets

Homo sapiens

Project description:c57bl/6j mice

| PRJNA900002 | ENA

Mitochondria proteomics of murine kidney podocytes

Project description:To understand how diabetes alters the protein subunits of mitochondrial Electron Transfer Chain (ETC) in the podocytes, we performed a proteomic analysis of mitochondrial proteins isolated from primary kidney podocytes of WT (C57BL/6J background) and Ins2Akita/+ diabetic (C57BL/6J background) mice.

2024-02-08 | PXD045828 | Pride

Mitochondria proteomics of murine kidney podocytes

2024-02-08 | PXD041202 | Pride

Tenotomized Achilles tendons of MRL/MpJ mice show scar-mediated healing, but have superior recovery of biomechanical properties

Project description:The purpose of this project is to determine changes in proteins and signaling pathways in injured tendons of C57BL/6j and MRL/MpJ mice. The MRL.MpJ mice have been reported to have a strong repair ability compared to that of C57BL/6j mice. Identifying signaling pathways in MRL/MpJ tendons that are distinct from C57BL/6j tendons will help us understand the molecular mechanisms underlying the better healing ability of MRL/MpJ mice. The samples include normal and injured Achilles tendons 4 weeks after tenotomy surgery obtained from male and female C57BL/6j and MRL/MpJ. The Achilles injury surgery was performed at 12 weeks of age. Normal tendons were obtained age, sex and strain-matched mice without surgery. The collected normal and inured tendons were subjected to proteomics.

2025-05-16 | PXD057712 | Pride

R_HAN_01.05 Mice sera fed with prebiotic or antibiotics

Project description:Control diet for C57Bl/6j Mice and effect on microbiota and immunity. Metabolome content of blood of these mice. LC-HRMS/MS C18+.

2019-07-05 | MSV000084062 | MassIVE

Mouse pancreatic cancer cells LC-MSMS

Project description:For liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis of mouse pancreatic cancer cells, we injected green fluorescent protein (GFP)-labeled KPC cells into the pancreases of C57BL/6J mice to establish orthotopic pancreatic cancer models. Following stress treatment, we isolated the GFP-labeled pancreatic cancer cells from the allografts of the stress-treated or control C57BL/6J mice. Subsequently, we conducted protein mass spectrometry on these GFP-labeled tumor cells.

2025-03-26 | PXD061963 | Pride

Effect of doxycycline treatment on germ-free mice

Project description:To characterize the mitochondrial stress response induced by Doxycycline in vivo in liver and kidneys, we administered doxycycline (Dox) at 500 mg/kg/day (mpkd) in the drinking water to 9 weeks-old germ-free C57BL/6J mice for 16 days, hence eliminating the potential confounding impacts of Doxycycline on the microbiome.

2022-09-14 | GSE202754 | GEO

mouse gut metagenome

Project description:Gut Microbiome breed:C57BL/6J mice Raw sequence reads

| PRJNA294800 | ENA

Sexually dimorphic characteristics of the small intestinal transcriptome of Fabp-gene ablated mice

Project description:Analysis of whole small intestine tissue of 10-week old C57BL/6J mice, C57BL/6J mice with the disruption of either Fabp2 gene or Fabp6 gene, and C57BL/6J mice with the simultaneous disruption of Fabp2 and Fabp6 genes. Fabp2 and Fabp6 are two types of fatty acid binding proteins expressed primarily in the small intestine.

2020-08-19 | GSE128862 | GEO

Ileum Microarray Data from Transcriptomics Driven Lipidomics (TDL) identifies the microbiome-regulated targets of ileal lipid metabolism Study

Project description:Microbiome regulation of lipid metabolism Germfree male C57BL/6J mice were purchased at 8 weeks of age from Charles River Laboratories (L'Arbresle, France). Mice were treated with 10^8 CFU/mL E. coli M8 strain (isolated from the feces of an ob/ob mouse) in drinking water for 14 days. At the end of the treatment, mice were subjected to an oral lipid tolerance test (OLTT) (with 6ml/kg of corn oil) after overnight fasting (14h). All mice were sacrificed 6 hours after the lipid tolerance test and ileum samples were collected for further analysis.

2017-11-08 | GSE99018 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data