Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA Sequencing Identification of MC38-P and Its Liver Metastatic Derivatives, MC38-LM3a and MC38-LM3b [Bulk RNA-seq]

ABSTRACT: RNA Sequencing Identification of MC38-P and Its Liver Metastatic Derivatives, MC38-LM3a and MC38-LM3b [Bulk RNA-seq]

PROVIDER: PRJNA1226250 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

RNA Sequencing Identification of MC38-P and Its Liver Metastatic Derivatives, MC38-LM3a and MC38-LM3b [Bulk RNA-seq]

Project description:Mouse-derived MC38 cells were subjected to in vivo selection to obtain colorectal cancer liver metastatic derivatives, MC38-LM3a and MC38-LM3b. Subsequently, their gene expression characteristics were identified through transcriptomic sequencing.

2025-09-10 | GSE290134 | GEO

The scRNA-seq analysis of immune cells in colorectal cancer liver metastatic lesions formed by MC38-LM3b-shScramble and MC38-LM3b-shSLAMF3.

Project description:MC38-LM3b-shScramble and MC38-LM3b-shSLAMF3 liver metastatic lesions formed by spleen injection were used to isolate immune cells with CD45 magnetic beads, followed by scRNA-seq sequencing to analyze the effect of SLAMF3 on the colorectal cancer liver metastatic microenvironment.

2025-09-10 | GSE290135 | GEO

Comparison of metastatic derivatives of colon cancer cell line selected in vivo

Project description:Using a human colorectal cancer cell line we incremented its metastatic capacity in a mouse model of liver and lung metastasis. Afterwards, a comparison between the different metastatic derivatives is done. Metastatic derivatives were selected by the use of a balb/c nude mouse model. Once the metastasis appeared, the cells were extracted and expanded in culture. Thereafter RNA was extracted and hybridized

2014-04-22 | E-GEOD-33350 | biostudies-arrayexpress

Bulk RNA-Seq analysis of MC38 colon carcinoma cells and MC38 Bap1-knockout cells in vitro

Project description:Bulk RNA-Seq analysis of MC38 colon carcinoma cells and MC38 Bap1-knockout cells in vitro

| PRJEB64235 | ENA

Comparison of metastatic derivatives of colon cancer cell line selected in vivo

2014-04-22 | GSE33350 | GEO

Bulk RNA-seq of Cd4 T cells from mice with MC38 tumors

Project description:Bulk RNA-seq of Cd4 T cells from mice with MC38 tumors

| PRJEB82069 | ENA

Single-cell RNA-seq of MC38 tumor model

Project description:Single-cell RNA-seq was performed on CD45+ and T cells sorted from MC38 tumors from mice.

2024-12-06 | E-MTAB-14590 | biostudies-arrayexpress

Bulk RNA-seq of CD11b+ cells from MC38 tumours in Kaede transgenic mice

Project description:Bulk RNA-seq of CD11b+ cells from MC38 tumours in Kaede transgenic mice

| PRJNA1271554 | ENA

Parental MeWo and highly metastatic LM2 human melanoma cell line derivatives with or without miR-199a or miR-1908

Project description:Human melanoma MeWo cells and their respective LM2 metastatic derivatives, generated through in vivo selection, were transcriptomically profiled in the context of miR-199a and miR-1908 gain- and loss-of-function in order to identify putative target genes for these miRNAs, MeWo cells and their respective LM2 metastatic derivatives in the context of miR-199a and miR-1908 gain- and loss-of-function

2013-02-10 | E-GEOD-35668 | biostudies-arrayexpress

RNA-seq of parental MC38 and anti-PD-1 resistant MC38 subcutaneous tumors

Project description:MC38 tumors resistant to anti-PD-1 treatment (MC38-resistant) were generated through serial in vivo passaging, and global gene expression analysis was used to compare resistant and parental tumors. MC38 and MC38-resistant tumors exhibited widespread changes in global gene expression.

2021-07-22 | GSE180309 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data