Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

MERFISH analysis of Sst-Cre mediated Dnmt1 knockout at E16.5

ABSTRACT: MERFISH analysis of Sst-Cre mediated Dnmt1 knockout at E16.5

PROVIDER: PRJNA1269984 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

MERFISH analysis of Sst-Cre mediated Dnmt1 knockout at E16.5

Project description:To investigate the effects of Dnmt1 Knockout in Sst expressing interneurons on celltype distribution in the embryonic brain, Sst-Cre/tdTomato/Dnmt1 loxp2 knockout mice and Sst-Cre/tdTomato control mice were analysed. 10 µm coronal sections of E16.5 brains were prepared for the Merscope platform using the commercially available Pan Neuro panel (Vizgen), covering 500 distinct transcripts.

2025-06-18 | GSE298591 | GEO

MERFISH spatial transcriptomic profiling of Sst+ interneurons in the postnatal mouse brain

Project description:Spatially resolved transcriptomic profiling of somatostatin-positive (Sst+) interneurons in the postnatal mouse brain using MERFISH (MERSCOPE, Vizgen). Two coronal brain sections corresponding to Paxinos Atlas levels 125 and 133 were collected from P5 C57BL/6J mice to characterize Sst+ cell type diversity and spatial organization

2026-05-26 | GSE330849 | GEO

MERFISH spatial transcriptomic profiling of Sst+ interneurons in the postnatal mouse brain

Project description:MERFISH spatial transcriptomic profiling of Sst+ interneurons in the postnatal mouse brain

| PRJNA1465791 | ENA

Collagen10-Cre Rosa26-tdTomato e16.5 single cell RNA-sequencing

Project description:Collagen10-Cre Rosa26-tdTomato e16.5 single cell RNA-sequencing

| PRJNA787704 | ENA

Gene expression profile at single cell level of SST expressing neurons from E16.5, P1 and P5 mouse neocortex [scRNA-seq E16.5]

Project description:Generation of developmental atlas of cortical SST+ cells from mouse model

2026-05-18 | GSE315700 | GEO

Gene expression profile at single cell level of SST expressing neurons from E16.5, P1 and P5 mouse neocortex [scRNA-seq E16.5]

Project description:Gene expression profile at single cell level of SST expressing neurons from E16.5, P1 and P5 mouse neocortex [scRNA-seq E16.5]

| PRJNA1398812 | ENA

Collagen10-Cre;Rosa26-tdTomato e16.5 single cell RNA-sequencing

Project description:In order to assess the descendants of hypertrophic chondrocytes, we utilized Collagen10-Cre;Rosa26-tdTomato mouse total bone isolated at e16.5 by Collagenase II digestion after mechanical digestion and soft tissue removal. After sequencing and downstream analysis using Seurat, we observed clusters of cells with gene profiles matching classically defined chondrocytes, skeletal stem and progenitor cells (SSPCs), and osteoblasts. Trajectory analysis reveals that the SSPCs lie intermediate to the transition of chondrocyte to osteoblast. We conclude that hypertrophic chondrocytes dedifferentiate to this progenitor stage before further differentiation.

2022-02-16 | GSE190616 | GEO

Gene expression profile at single cell level of SST expressing neurons from E16.5, P1 and P5 mouse neocortex

Project description:Generation of developmental atlas of cortical SST+ cells from mouse model

2026-05-18 | GSE271016 | GEO

Gene expression profile at single cell level of SST expressing neurons from E16.5, P1 and P5 mouse neocortex [2]

Project description:Generation of developmental atlas of cortical SST+ cells from mouse model

2026-05-18 | GSE271947 | GEO

Gene expression profile at single cell level of SST expressing neurons from E16.5, P1 and P5 mouse neocortex [scRNA-seq P5 Striatum]

Project description:Generation of developmental atlas of cortical SST+ cells from mouse model

2026-05-18 | GSE315702 | GEO