Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Lynx canadensis (Canada lynx) genome assembly, mLynCan4

PROVIDER: PRJNA533103 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR25749000_1.fastq.gz	Fastqsanger.gz
	SRR25749000_2.fastq.gz	Fastqsanger.gz
	SRR25749001_1.fastq.gz	Fastqsanger.gz
	SRR25749001_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 69

Similar Datasets

Project description:Lynx canadensis (Canada Lynx), mLynCan4, sequence data

| PRJNA1008620 | ENA

Lynx canadensis isolate:LIC74

Project description:Lynx canadensis (Canada Lynx) genome sequencing and assembly, primary haplotype, v1

| PRJNA489107 | ENA

Lynx canadensis isolate:LIC74

Project description:Lynx canadensis (Canada Lynx) genome sequencing and assembly, alternate haplotype, v1

| PRJNA489108 | ENA

Project description:Canada lynx (Lynx canadensis) low-coverage whole genome resequencing

| PRJNA803364 | ENA

Lynx canadensis

Project description:Lynx canadensis overview

| PRJNA490577 | ENA

Lynx canadensis isolate:TCAG-5550

Project description:Lynx canadensis (isolate TCAG-5550) genome sequencing and assembly

| PRJNA1330338 | ENA

Genome scans reveal species-specific selection in the genus Lynx

Project description:Lynx canadensis and Lynx rufus samples for selection genome-wide genomic scan

| PRJEB109976 | ENA

ONT ULK sequencing of a male cape dune mole-rat kidney sample

Project description:One ONT-ULK sequencing run from the kidney of a single male CDMR (Bathyergus suillus) sample used to make the mBatSui1.1.primary genome assembly as an evolutionary comparator to our telomere-to-telomere naked mole-rat genome assembly. Specifically, we assembled a CDMR from a wild-derived sample in South African cape and sequenced in Toronto, Canada, using PacBio HiFi (89 Gb, read N50 = 18 Kb) and ONT-ULK (55 Gb, read N50 = 43 Kb) reads (contig N50 = 33 Mb, Compleasm S = 99%, QV = 71.0). This accession stores the ONT-ULK data for this assembly.

2026-08-05 | E-MTAB-17420 | biostudies-arrayexpress

Pacbio Hifi sequencing of a male cape dune mole-rat kidney sample

Project description:One PacBio Hifi sequencing run from the kidney of a single male CDMR (Bathyergus suillus) sample used to make the mBatSui1.1.primary genome assembly as an evolutionary comparator to our telomere-to-telomere naked mole-rat genome assembly. Specifically, we assembled a CDMR from a wild-derived sample in South African cape and sequenced in Toronto, Canada, using PacBio HiFi (89 Gb, read N50 = 18 Kb) and ONT-ULK (55 Gb, read N50 = 43 Kb) reads (contig N50 = 33 Mb, Compleasm S = 99%, QV = 71.0). This accession stores the Pacbio Hifi data for this assembly.

2026-08-05 | E-MTAB-17312 | biostudies-arrayexpress

Pacbio Hifi sequencing of a naked mole-rat male subordinate kidney sample

Project description:Two PacBio Hifi sequencing runs from the kidney of a single male NMR sample used to make the mHetGla4.1.primary genome assembly. Specifically, we assembled a second NMR genome from an unrelated male of a separate captive colony in Toronto, Canada, using PacBio HiFi (155.8 Gb, read N50 = 11.45 Kb) and ONT-LSK (299.6 Gb, read N50 = 10.1 Kb) reads (contig N50 = 75.7 Mb, Compleasm S = 98%). This accession stores the Pacbio Hifi data for this independent assembly.

2026-08-05 | E-MTAB-17313 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data