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Proteomics4D-SmartDIA quantitative protein set of 30 different altitudehuman placental tissue samples
4D-SmartDIA quantitative protein set of 30 human placental tissue samples (3 sets of 10 repetitions)
ORGANISM(S): Homo Sapiens 
2024-03-21 | PXD050881 |
ProteomicsQuantitative phosphoproteomic analysis of overexpressing PPP1R12B and control Huh7 cells samples using 4D-SmartDIA
Quantitative phosphoproteomic analysis of overexpressing PPP1R12B and control Huh7 cells samples using 4D-SmartDIA.
ORGANISM(S): Homo Sapiens 
2025-06-10 | PXD064803 |
Proteomics4D Smart DIA Quantitative Proteomic Analysis of Lysosomal Fractions Isolated from ASFV-Infected PAMs Following Bacterial Challenge
This study performs 4D Smart DIA quantitative proteomic analysis on lysosomal fractions isolated from porcine alveolar macrophages (PAMs) that were first infected with African swine fever virus (ASFV) and then subjected to bacterial challenge. Lysosomal extraction was carried out at 6 h post‑bacteri...
ORGANISM(S): Sus scrofa domesticus (domestic pig) 
2026-09-03 | PXD082798 | Pride
Pig  african swine fever virus (asfv)  porcine alveolar macrophages (pams)  lysosome  4d smartdia proteomics 
Other3D Chromatin organization of signal-induced specific enhancers safeguards early ESC differentiation by promoting cluster gene expression [Hi-ChIP]
Cells undergo fate transformation in response to external signaling stimuli, a process that depends on the precise expression of specific genes, but the intrinsic regulatory mechanisms remain largely unclear. Here, by integrating bulk RNA sequencing, single-cell RNA sequencing, 4D-SmartDIA quantitat...
ORGANISM(S): Mus musculus 
2026-04-20 | GSE315092 | GEO
Transcriptomics3D Chromatin organization of signal-induced specific enhancers safeguards early ESC differentiation by promoting cluster gene expression [scRNA-seq]
Cells undergo fate transformation in response to external signaling stimuli, a process that depends on the precise expression of specific genes, but the intrinsic regulatory mechanisms remain largely unclear. Here, by integrating bulk RNA sequencing, single-cell RNA sequencing, 4D-SmartDIA quantitat...
ORGANISM(S): Mus musculus 
2026-04-20 | GSE276738 | GEO
Transcriptomics3D Chromatin organization of signal-induced specific enhancers safeguards early ESC differentiation by promoting cluster gene expression [RNA-seq]
Cells undergo fate transformation in response to external signaling stimuli, a process that depends on the precise expression of specific genes, but the intrinsic regulatory mechanisms remain largely unclear. Here, by integrating bulk RNA sequencing, single-cell RNA sequencing, 4D-SmartDIA quantitat...
ORGANISM(S): Mus musculus 
2026-04-20 | GSE276734 | GEO
Genomics3D Chromatin organization of signal-induced specific enhancers safeguards early ESC differentiation by promoting cluster gene expression [CUT&Tag]
Cells undergo fate transformation in response to external signaling stimuli, a process that depends on the precise expression of specific genes, but the intrinsic regulatory mechanisms remain largely unclear. Here, by integrating bulk RNA sequencing, single-cell RNA sequencing, 4D-SmartDIA quantitat...
ORGANISM(S): Mus musculus 
2026-04-20 | GSE276727 | GEO
Genomics3D Chromatin organization of signal-induced specific enhancers safeguards early ESC differentiation by promoting cluster gene expression [ATAC-seq]
Cells undergo fate transformation in response to external signaling stimuli, a process that depends on the precise expression of specific genes, but the intrinsic regulatory mechanisms remain largely unclear. Here, by integrating bulk RNA sequencing, single-cell RNA sequencing, 4D-SmartDIA quantitat...
ORGANISM(S): Mus musculus 
2026-04-20 | GSE276726 | GEO
Proteomics4D SmartDIA Quantitative Phosphorylation Modified Proteomics of Grape Leaves
In this study, we employed a comprehensive suite of advanced techniques to conduct quantitative omics research on phosphorylated proteins in VqLecRKV.4 overexpressing grapevine lines after inoculation with E. necator. These techniques included protein extraction, enzymatic digestion, modified peptid...
ORGANISM(S): Vitis Vinifera 
2025-04-05 | PXD062666 |
ProteomicsProteomics data of erythrocytes of long-term high altitude acclimated lowlanders
Purified RBC pellets were sent on dry ice to Jingjie PTM BioLab (Hangzhou, China) for 4D-smartDIA proteomic analysis, as described.44 The output DIA data were processed using the DIA-NN search engine (v.1.8) and the tandem mass spectra were searched against the human reference proteins (Homo_sapiens...
ORGANISM(S): Homo Sapiens 
2024-10-26 | PXD057233 |
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