4d-dia proteomics

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Proteomics (90)
Unknown (28)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (31)
Andropogon gerardi (31)
Bacteria (31)
Bartonella quintana JK 31 (31)
Canis lupus familiaris (31)
Cnidaria (31)
Ectopseudomonas oleovorans CECT 5344 (31)
Homo sapiens (25)
Mus musculus (14)
Bos taurus (2)
Gallus gallus (2)
Rattus rattus (2)
Alternaria alternata (1)
Bos grunniens (1)
Cordyceps cicadae (1)
Cordyceps militaris (1)
Danio rerio (1)
Elaphurus davidianus (1)
Fragaria vesca subsp. vesca (1)
Glycine max (1)
Nicotiana benthamiana (1)
Ophiocordyceps sinensis (1)
Pinus koraiensis (1)
Proteinus (1)
Rattus norvegicus (1)
Rhinomonas reticulata (1)
Saccharomyces cerevisiae (1)
Spirometra erinaceieuropaei (1)
Sus scrofa domesticus (1)
Triticum aestivum (1)

Repository

iProX (59)
pride (31)

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Cell culture (6)
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Whole body (1)

Disease

Alzheimer's disease (1)
COVID-19 (1)
Cardiovascular system disease (1)
Cerebrovascular disease (1)
Cognitive disorder (1)
Disease free (1)
Hepatitis B (1)
Malignant neoplasm of ovary (1)
Osteosarcoma (1)
Swine influenza (1)

Technology Type

Mass Spectrometry (31)
Data-independent acquisition (14)
Bottom-up proteomics (8)
Data-dependent acquisition (2)
DiaPASEF (2)
SWATH MS (2)
Top-down proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Shotgun proteomics (1)

Publication Date

2026 (31)
2024 (27)
2025 (25)
2023 (7)

Release Date

2025 (17)
2024 (10)
2023 (1)

Lab affiliation

1The First Department of Clinical Medicine, Fujian University of Traditional Chinese Medicine, Fuzhou 350122, Fujian Province, China. 2Medical Genetic Diagnosis and Therapy Center of Fujian Maternity and Child Health Hospital, College of Clinical Medicine for Obstetrics & Gynecology and Pediatrics, Fujian Medical University, Fujian Provincial Key Laboratory of Prenatal Diagnosis and Birth Defects, Fuzhou 350001, Fujian Province, China. (1)
Beijing Key Laboratory for Radiobiology, Beijing Institute of Radiation Medicine, Beijing 100850, P.R. China (1)
Beijing Tongren Hospital, Capital Medical University (1)
Chian (1)
College of Veterinary Medicine, Inner Mongolia Agricultural University, Hohhot, Inner Mongolia, PR China (1)
Department of Gastroenterology, People's Hospital of Xinjiang Uygur Autonomous Region, Urumqi, Xinjiang Uygur Autonomous Region, China (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA (1)
Department of Microbiology & Infectious Disease Center, School of Basic Medical Sciences, Peking University Health Science Center (1)
Department of Nephrology, Zhejiang University Medical College Affiliated Sir Run Run Shaw Hospital, Qingchun Road 3rd, Hangzhou 310000, Zhejiang Province, China (1)
Department of Ophthalmology, The First Affiliated Hospital of Fujian Medical University (1)
Department of Orthopaedics, Hebei Medical University Third Hospital, Shijiazhuang, China (1)
Department of Pediatrics, the Affiliated Huai’an No.1 People’s Hospital of Nanjing Medical University, Huai’an , China (1)
Department of Pharmacy, Nanjing Drum Tower Hospital, Affiliated Hospital of Nanjing University Medical School (1)
Department of Rehabilitation Medicine, The Second Affiliated Hospital, School of Medicine, South China University of Technology, Guangzhou 510180, China (1)
Faculty of Animal Science and Technology,Key Laboratory of Porcine Gene Editing and Xenotransplantation,Yunnan Agricultural University,China (1)
Fujian medical university (1)
Key Laboratory of Brain Functional Genomics of Shanghai and Ministry of Education, Institute of Brain Functional Genomics, School of Life Science and the Collaborative Innovation Center for Brain Science, East China Normal University, Shanghai, China (1)
Key Laboratory of Brain Functional Genomics of Shanghai and the Ministry of Education, Institute of Brain Functional Genomics, School of Life Science and the Collaborative Innovation Center for Brain Science, East China Normal University, Shanghai 200062, China (1)
Key Laboratory of Metabolic Cardiovascular Diseases Research of National Health Commission, Ningxia Key Laboratory of Vascular Injury and Repair Research, Yinchuan, Ningxia 750004, P.R. China (1)
Laboratory of Connective Tissues Biology, GIGA-Cancer, University of Liège, 4000 Liège, Belgium (1)
Liver Research Center, Beijing Friendship Hospital, Capital Medical University (1)
Orthopedic Oncology Institute, Department of Orthopedic Surgery, Tangdu Hospital, Fourth Military Medical University, Xi’an, China (1)
PPGEMN, School of Engineering, Mackenzie Presbyterian University & MackGraphe - Mackenzie Institute for Research in Graphene and Nanotechnologies, Mackenzie Presbyterian Institute, São Paulo – SP, 01302-907, Brazil (1)
Shanghai University of Traditional Chinese Medicine (1)
Sichuan Agricultural University (1)
State Key Laboratory of Coordination Chemistry, Chemistry and Biomedicine Innovation Center (ChemBIC), School of Life Sciences, Nanjing University, Nanjing 210093, P. R. China. (1)
Sun Yat-sen university, China (1)
Women’s Reproductive Health Laboratory of Zhejiang Province, Women’s Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang, 310006, China (1)
Zhejiang University, Hangzhou 310006 Zhejiang, ChinaChina (1)
huazhong agriculture university (1)

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4D-DIA Proteomics Uncovers New Insights into Host Salivary Response Following SARS-CoV-2 Omicron Infection

We applied a 4D dia-PASEF proteomic approach to investigate the salivary protein profile of individuals with early-to-acute SARS-CoV-2 Omicron infection. We combined proteomics and functional analyses with feature selection and ROC multivariate analysis to identify and assess salivary proteins for C...

ORGANISM(S): Homo sapiens (Human)

2025-01-18 | PXD054133 | Pride

Integrated Amino Acid Profiling and 4D-DIA Proteomics Reveal Protein Quality Divergence and Metabolic Adaptation in <i>Cordyceps</i> Species.

Not available

S-EPMC12113033 | biostudies-literature

4D-DIA Proteomics Uncovers New Insights into Host Salivary Response Following SARS-CoV-2 Omicron Infection.

Not available

S-EPMC11812090 | biostudies-literature

Combined spatial metabolomics and 4D-DIA quantitative proteomics approaches to explore the relationship between lung cancer and the heart.

Not available

S-EPMC12037715 | biostudies-literature

4D-DIA-Based Quantitative Proteomic Analysis Reveals the Involvement of TRPV2 Protein in Duck Tembusu Virus Replication.

Not available

S-EPMC11680370 | biostudies-literature

4D-DIA proteomic analysis of SMT-induced cytotoxicity in B16F10 mouse melanoma cells

This dataset contains a 4D-DIA proteomic analysis of B16F10 mouse melanoma cells treated with SMT (SM@CMC-KP101). B16F10 cells were divided into two groups: a PBS control group and an SMT treatment group. After drug exposure, cellular proteins were extracted, digested and analyzed by LC-MS/MS using ...

ORGANISM(S): Mus musculus (Mouse)

2026-04-02 | PXD074961 | Pride

Proteomics B16f10 Smt Mouse melanoma Sm@cmc-kp101 4d-dia Quantitative proteomics Lc-ms/ms

Molecular mechanisms of lung injury from ultra high and conventional dose rate pulsed radiation based on 4D DIA proteomics study.

Not available

S-EPMC11825874 | biostudies-literature

Integrated amino acid profiling and 4D-DIA proteomics reveal protein quality divergence and metabolic adaptation in Cordyceps species

To explore the differences in protein quality among classic medicinal entomopatho-genic fungi and to evaluate their metabolic adaptability, we analyzed the amino acid composition and proteomic characteristics of Cordyceps sinensis (CS), Cordyceps militaris (CM) and Cordyceps cicadae (CC). Quantitati...

ORGANISM(S): Ophiocordyceps Sinensis Cordyceps Militaris Cordyceps Cicadae

2025-04-24 | PXD063259 |

Uncovering proteome variations and concomitant quality changes of different drying methods <i>Cordyceps sinensis</i> by 4D-DIA structural proteomics.

Not available

S-EPMC11835701 | biostudies-literature

4D-DIA-based quantitative proteomic analysis reveals the involvement of TRPV2 protein in duck Tembusu virus replication

Using a quantitative proteomics approach based on 4D-DIA combined with LC-MS/MS analysis, we identified TRPV2 as a potential host resistance factor that was significantly upregulated in DF-1 cells 48 hours post-DTMUV infection. Further experiments involving siRNA-mediated knockdown of TRPV2 expressi...

ORGANISM(S): Gallus Gallus

2024-09-01 | PXD055452 |

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