actg1 - OmicsDI

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Transcriptomics (749)
Genomics (147)
Unknown (112)
Metabolomics (39)
Proteomics (13)
Genomic (1)
Methylation profiling (1)
Other (1)

Organisms

Homo sapiens (260)
Mus musculus (223)
Arabidopsis thaliana (112)
Caenorhabditis elegans (36)
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Organisms

Mus musculus (8)
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Repository

biostudies-arrayexpress (807)
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pride (11)
geo (10)
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Tissue

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Vestibular hair cell (1)
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Inner ear (1)
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Disease

Normal (4)
Ovarian cancer (2)
P. berghei NK65 infected erythrocyte's infection (1)
Oropharynx squamous-cell carcinoma in DiseaseLocation oropharynx has DiseaseStaging lymph node negative (N0) (1)
Multibacillary (1)
P. berghei ANKA GFP sporozoite's infection (1)
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Embryonic lethal at day 8.5 to 9.5 (1)
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ARR7ox-4-11 (1)
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Technology Type

Mass spectrometry (22)
Mass spectrometry assay (13)
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Illumina HiSeq 2500 (2)
Illumina HiSeq 2000 (2)
NMR spectroscopy assay (2)
Bottom-up proteomics (2)
Illumina HiSeq 2500, ILLUMINA (1)
Affymetrix_SNP6_raw, Illumina HT 12, Agilent ncRNA 60k (1)
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Illumina HiSeq 2000, ILLUMINA (1)
SRM/MRM (1)
Top-down proteomics (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (19)
Illumina HiSeq 4000 (15)
Illumina HiSeq 2500 (12)
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G2565AA DNA microarray scanner [Agilent] (4)
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N/a (2)
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PCR machine; Superscript II polymerase Kit (Invitrogen); PCR machine; AMPure XP beads; TruSeq stranded mRNA sample prep kit.; TruSeq Stranded mRNA stranded prep. kit (1)
Centrifuge 5424R (Eppendorf); miRNeasy Mini Kit (Qiagen); TURBO^TM DNase (Ambion); Bioanalyser (Agilent) (1)
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Centrifuge 5424R (Eppendorf); RNAprotect Bacteria Reagent (Qiagen) (1)

Publication Date

2013 (97)
2010 (90)
2011 (88)
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2014 (74)
2008 (66)
2009 (45)
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2006 (23)
2005 (22)
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2017 (18)
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2022 (14)
2021 (11)
2019 (11)
2020 (7)
2018 (6)
2003 (6)
2004 (5)

CHEBI ID

CHEBI:30769 (13)
CHEBI:25017 (11)
CHEBI:15891 (11)
CHEBI:28300 (10)
CHEBI:16919 (10)
CHEBI:15354 (10)
CHEBI:18132 (9)
CHEBI:16449 (9)
CHEBI:16811 (9)
CHEBI:18186 (9)
CHEBI:28044 (9)
CHEBI:27897 (9)
CHEBI:15428 (9)
CHEBI:18012 (9)
CHEBI:17368 (9)
CHEBI:17268 (8)
CHEBI:7916 (8)
CHEBI:78320 (8)
CHEBI:27266 (8)
CHEBI:18237 (8)
CHEBI:25094 (8)
CHEBI:17822 (8)
CHEBI:32816 (8)
CHEBI:17596 (8)
CHEBI:17568 (8)
CHEBI:17154 (8)
CHEBI:16737 (8)
CHEBI:16335 (8)
CHEBI:1148 (7)
CHEBI:17126 (7)

Metabolite Name

Hypoxanthine (9)
Creatine (9)
Uracil (8)
Adenine (8)
Choline (8)
Creatinine (7)
Xanthine (7)
L-Tyrosine (6)
Leucine (5)
Cytosine (5)
Acetylcholine (5)
Citrulline (5)
Histamine (5)
Succinate (5)
Fumarate (5)
Citrate (5)
AMP (5)
L-Tryptophan (5)
Inosine (5)
N6,N6,N6-Trimethyl-L-lysine (4)
2-Hydroxycinnamic acid (4)
GTP (4)
Methionine (4)
Glutamate (4)
Triethanolamine (4)
Phosphoenolpyruvate (4)
GDP (4)
ATP (4)
Hydroquinone (4)
Acetylcarnitine (4)

First Public Date

2026 (7)
2025 (4)
2023 (3)
2022 (2)
2024 (1)
2021 (1)
2019 (1)
2015 (1)

Study type

Transcription profiling by array (507)
RNA-seq of coding RNA (106)
ChIP-seq (52)
RNA-seq of non coding RNA (20)
Unknown experiment type (15)
Transcription profiling by tiling array (14)
Comparative genomic hybridization by array (12)
Methylation profiling by array (10)
ChIP-chip by tiling array (9)
RNAi profiling by array (7)
Other (7)
RNA-seq of coding RNA from single cells (7)
MicroRNA profiling by array (5)
ChIP-chip by array (4)
Methylation profiling by high throughput sequencing (4)
DNA-seq (3)
RNA-seq of total RNA (3)
CLIP-Seq (2)
Cell line - High-throughput sequencing (2)
Transcription profiling by RT-PCR (2)
CUT&RUN (2)
Cell line - One-color microarray (1)
High-throughput sequencing (1)
Whole chromosome random sequencing (1)
Animal - High-throughput sequencing (1)
Genotyping by array (1)
MicroRNA profiling by high throughput sequencing (1)
ATAC-seq (1)
Hi-C (1)
RIP-seq (1)

Release Date

2013 (100)
2010 (91)
2012 (90)
2011 (89)
2014 (76)
2008 (66)
2009 (48)
2015 (45)
2007 (38)
2023 (32)
2016 (30)
2025 (29)
2022 (26)
2006 (23)
2005 (22)
2026 (18)
2017 (18)
2024 (17)
2021 (16)
2019 (13)
2020 (10)
2018 (10)
2003 (7)
2004 (5)

Lab affiliation

Instituto Superior de InvestigacionesBiológicas (INSIBIO), CONICET‐UNT, and Instituto de Biología “Dr. FranciscoD. Barbieri,” Facultad de Bioquímica, Química y Farmacia, UNT, San Miguel de Tucumán, Argentina (1)
State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Animal Reproduction Institute, Guangxi University, Nanning, Guangxi, China (1)
The Roslin Institute, University of Edinburgh (1)
1The First Department of Clinical Medicine, Fujian University of Traditional Chinese Medicine, Fuzhou 350122, Fujian Province, China. 2Medical Genetic Diagnosis and Therapy Center of Fujian Maternity and Child Health Hospital, College of Clinical Medicine for Obstetrics & Gynecology and Pediatrics, Fujian Medical University, Fujian Provincial Key Laboratory of Prenatal Diagnosis and Birth Defects, Fuzhou 350001, Fujian Province, China. (1)
USACEHR (1)
Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota (1)
Proteomics Core of Bioscience Research Centre, School of Biological Sciences, Nanyang Technological University, Singapore (1)
Proteomics lab, Indian Institute of Technology (IIT) Bombay (1)
IBP RAS (1)
Oregon Hearing Research Center Oregon Health & Science University Portland OR 97239 USA (1)
Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, USA (1)

Tags

xref:PubMed:41678638 (4)
xref:PubMed:42331846 (3)
xref:PubMed:30944477 (1)
xref:PubMed:36372898 (1)

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iTRAQ Protemics of mdx vs. mdx/Actg1-TG mouse skeletal muscle

Duchenne muscular dystrophy (DMD) is an X-linked recessive disease caused by deleterious mutations in the DMD gene, rendering non-functional forms or complete absence of the protein dystrophin. Eccentric contraction-induced force loss is the most robust and reproducible phenotype of dystrophin-defic...

ORGANISM(S): Mus musculus (Mouse)

2018-10-22 | PXD009680 | Pride

Nucleotide- and Protein-Dependent Functions of Actg1.

Not available

S-EPMC9582642 | biostudies-literature

ACTG1 driven splicing of P4HB gene enhances EMT and bladder cancer progression.

Not available

S-EPMC12552429 | biostudies-literature

ACTG1 facilitates proliferation and epithelial-mesenchymal transition-mediated metastasis via COL21A1 in gastric cancer.

Not available

S-EPMC12907117 | biostudies-literature

Extreme Phenotypic Variability of ACTG1-Related Disorders in Hearing Loss.

Not available

S-EPMC11672310 | biostudies-literature

DFNA20/26 and Other ACTG1-Associated Phenotypes: A Case Report and Review of the Literature.

Not available

S-EPMC8544197 | biostudies-literature

Genomic Amplification and Functional Dependency of the Gamma Actin Gene ACTG1 in Uterine Cancer.

Not available

S-EPMC7698702 | biostudies-literature

Assessing actin-pathway interactions in variants identified in patients with ocular coloboma

We used whole exome sequence to identify de novo mutations in patients with ocular coloboma. Three of these encoded actin pathway components, ACTG1, TWF1 and LCP1. Mass spectrometry-based interactomes of wild-type and mutant proteins were performed to reveal altered functional interactions for all...

ORGANISM(S): Homo sapiens (Human)

2017-05-24 | PXD005090 | Pride

Gfp-trap actin actg1 twf1 lcp1 hek293

Phenotypic Heterogeneity in a DFNA20/26 family segregating a novel ACTG1 mutation.

Not available

S-EPMC4736096 | biostudies-literature

De Novo ACTG1 Variant Expands the Phenotype and Genotype of Partial Deafness and Baraitser-Winter Syndrome.

Not available

S-EPMC8776155 | biostudies-literature

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1066 Results

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