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TranscriptomicsGene expression in Xenopus laevis embryogenesis
Analysis of whole body of unfertilized eggs and two-cell stage, 16-cell stage, stage 8, stage 9, stage 10.5, stage 12, stage 15, stage 20, stage 25, stage 30, stage 35 and stage 40 embryos. Results provide insight into the global molecular changes in Xenopus embryogenesis. Gene expressions in intact...
ORGANISM(S): Xenopus laevis 
2015-09-05 | E-GEOD-40620 | biostudies-arrayexpress
TranscriptomicsTranslation profiling of Drosophila during early embryogenesis
Translational control is critical for early Drosophila embryogenesis and is exerted mainly at the gene-specific level. To understand the post-transcriptional regulation during Drosophila early embryonic development, we used the sucrose polysomal gradient analyses and GeneChip analysis to illustrate ...
ORGANISM(S): Drosophila melanogaster 
2008-03-14 | E-GEOD-5430 | biostudies-arrayexpress
TranscriptomicsGene Expression Atlas for Human Embryogenesis
Gene expression profiling has provided critical insights into the molecular pathways underlying development of model organisms, however little information is available on regulated gene expression during human embryogenesis. We have now filled this important gap of knowledge by performing genome-wid...
ORGANISM(S): Homo sapiens 
2010-07-06 | E-GEOD-15744 | biostudies-arrayexpress
GenomicsComprehensive identification of long non-coding RNAs expressed during zebrafish embryogenesis [ChIP_Seq]
Long non-coding RNAs (lncRNAs) comprise a diverse class of transcripts that structurally resemble mRNAs but do not encode proteins. Recent genome-wide studies in human and mouse have annotated lncRNAs expressed in cell lines and adult tissues, but a systematic analysis of lncRNAs expressed during ve...
ORGANISM(S): Danio rerio 
2011-11-17 | E-GEOD-32899 | biostudies-arrayexpress
ProteomicsAcquisition of embryogenic competence during protoplast development of Fagopyrum
Reprogramming in protoplast cultures is a key step for acquiring embryogenic competence by dedifferentiated cells, thus leading to plant regeneration. Therefore, to better understand factors trigging the processes, this work focuses on analysing proteomes, cell wall composition and changes in the ex...
ORGANISM(S): Fagopyrum Esculentum (ncbitaxon:3617) Fagopyrum Tataricum (ncbitaxon:62330) 
MSV000095861 | MassIVE
GenomicsDynamics of enhancer chromatin signatures mark the transition from pluripotency to cell specification during embryogenesis
The generation of distinctive cell types that form different tissues and organs requires precise, temporal and spatial control of gene expression. This depends on specific cis-regulatory elements distributed in the non-coding DNA surrounding their target genes. Studies performed on mammalian embryon...
ORGANISM(S): Danio rerio 
2012-05-08 | E-GEOD-32483 | biostudies-arrayexpress
TranscriptomicsSubtractive Hybridization Reveals Novel Genes Associated with D. melanogaster Early Embryogenesis.
Background: The early stages of D. melanogaster embryogenesis involve cell migration and pattern formation, and lead to the formation of three germ layers (the ectoderm, mesoderm and endoderm). These developmental events are controlled by differential gene activity. In the current study we used a su...
ORGANISM(S): Drosophila melanogaster 
2010-05-16 | E-GEOD-15000 | biostudies-arrayexpress
ProteomicsThe Dynamic Proteome in Arabidopsis Thaliana Early Embryogenesis
In this project, we profiled the dynamics of proteome during Arabidopsis early embryogenesis using nanoproteomics. In addition, we identified some proteins which may be important during this process. Combining with RNA-seq, we unveiled the relationship between RNA and proteins during Arabidopsis ear...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-09-07 | PXD031922 | Pride
Embryogenesis Proteome Arabidopsis thaliana 
TranscriptomicsExpression data for mouse embryogenesis from oocyte to newborn
Studies in mouse have led to enormous progress in our understanding of early human development. The identification of genes and the signaling pathways involved in mouse embryogenesis have helped us to better understand fertilization, morulation, gastrulation, organogenesis and embryonic development ...
ORGANISM(S): Mus musculus 
2013-09-11 | E-GEOD-39897 | biostudies-arrayexpress
Metabolomics1H NMR metabolite monitoring during the differentiation of human induced pluripotent stem cells provides new insights into the molecular events that regulate embryonic chondrogenesis
The integration of cell metabolism with signalling pathways, transcription factor networks and epigenetic mediators is critical in coordinating molecular and cellular events during embryogenesis. Induced pluripotent stem cells (IPSCs) are an established model for embryogenesis, germ layer specificat...
2023-05-24 | MTBLS4854 | MetaboLights
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